RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SDHAF2Q9NX18 166 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
COL4A6-206ENST00000477085 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 H0Y980 276 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 CDS2O95674 445 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 IGHV4-39P01824 125 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 NFYBP25208 207 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 UCP1P25874 307 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 COL8A1P27658 744 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 IL15RAQ13261 267 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 GGNBP1Q5YKI7 109 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 FAM219AQ8IW50 185 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
COL4A6-206ENST00000477085 HYLS1Q96M11 299 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF714Q96N38 554 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ZNRD1Q9P1U0 126 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
COL4A6-206ENST00000477085 RGS13O14921 159 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ATP6V1G1O75348 118 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 IGKV1-39P01597 117 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 IGKV1D-39P04432 117 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 TMEM268Q5VZI3 342 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 WDR25Q64LD2 544 aaPredicted RBP11.87□□□□□ -0.51
COL4A6-206ENST00000477085 HEPN1Q6WQI6 88 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ODF3L1Q8IXM7 274 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 LGI3Q8N145 548 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF525Q8N782 197 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 SLC35G3Q8N808 338 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 NRGNQ92686 78 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 TIMD4Q96H15 378 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 PDCD10Q9BUL8 212 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 NARFLQ9H6Q4 476 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 MIOXQ9UGB7 285 aa11.87□□□□□ -0.51
COL4A6-206ENST00000477085 LGALSLQ3ZCW2 172 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-206ENST00000477085 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
COL4A6-206ENST00000477085 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
COL4A6-206ENST00000477085 ASB13Q8WXK3 278 aa11.86□□□□□ -0.51
COL4A6-206ENST00000477085 NEIL1Q96FI4 390 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-206ENST00000477085 FAM208BQ5VWN6 2430 aa11.86□□□□□ -0.51
COL4A6-206ENST00000477085 LINC00473A8K010 186 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 F5H0A9 414 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-206ENST00000477085 ITGB1BP1O14713 200 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 RGS11O94810 467 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 COX6B1P14854 86 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 MSMO1Q15800 293 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 ZBTB34Q8NCN2 500 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 EDARADDQ8WWZ3 215 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 CCL19Q99731 98 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 NMES1Q9C002 83 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 GAL3ST2Q9H3Q3 398 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
COL4A6-206ENST00000477085 LPAR3Q9UBY5 353 aa11.85□□□□□ -0.51
COL4A6-206ENST00000477085 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 C22orf46C9J442 243 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 RAMP3O60896 148 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 GPR6P46095 362 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-206ENST00000477085 GNG10P50151 68 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 DLX1P56177 255 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 Q3ZCU0 254 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 LY6G5BQ8NDX9 201 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 OR10A7Q8NGE5 316 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 OR8B3Q8NGG8 313 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 OR8B2Q96RD0 313 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 ABHD14AQ9BUJ0 271 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 RNF126Q9BV68 326 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 CELSR2Q9HCU4 2923 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 RAB9BQ9NP90 201 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 AKAP6Q13023 2319 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 C17orf98A8MV24 154 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 H0YIZ8 118 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF16P17020 682 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-206ENST00000477085 CXCL2P19875 107 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 GPR12P47775 334 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-206ENST00000477085 ZNF695Q8IW36 515 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 RBMXL1Q96E39 390 aaKnown RBP11.84□□□□□ -0.51
COL4A6-206ENST00000477085 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
COL4A6-206ENST00000477085 A0A0G2JRQ6 117 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 GPR37O15354 613 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 S100GP29377 79 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 PRB3Q04118 309 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-206ENST00000477085 OR2B11Q5JQS5 317 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
COL4A6-206ENST00000477085 C8orf46Q8TAG6 207 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 RBPMSQ93062 196 aaKnown RBP11.83□□□□□ -0.52
COL4A6-206ENST00000477085 GAB2Q9UQC2 676 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 HSPB11Q9Y547 144 aa11.83□□□□□ -0.52
COL4A6-206ENST00000477085 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 SAA2-SAA4A0A096LPE2 208 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 J3QKU1 62 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms