RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 UPK1BO75841 260 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 SNRNP70P08621 437 aaKnown RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 FCGR3AP08637 254 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 CD3GP09693 182 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF182P17025 639 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 BLCAPP62952 87 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 HABP2Q14520 560 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 HERPUD1Q15011 391 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF260Q3ZCT1 412 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 Q3ZCU0 254 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 ZFP69Q49AA0 526 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 CDNFQ49AH0 187 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 MOB1BQ7L9L4 216 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 IZUMO1Q8IYV9 350 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 LYG1Q8N1E2 194 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 C8orf31Q8N9H6 132 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 DTX3Q8N9I9 347 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 OR4F5Q8NH21 305 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 OR56B4Q8NH76 319 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 SLC25A46Q96AG3 418 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 YPEL2Q96QA6 119 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 MMP27Q9H306 513 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 SPATA2Q9UM82 520 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 RBMX2Q9Y388 322 aaKnown RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 AMMECR1Q9Y4X0 333 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-208ENST00000476739 MMP24Q9Y5R2 645 aa7.76□□□□□ -1.17
HDAC3-208ENST00000476739 IGHV3-72A0A0B4J1Y9 119 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 IGHV1-3A0A0C4DH29 117 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 TMEM235A6NFC5 223 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 SH2D7A6NKC9 451 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-208ENST00000476739 SERPINE3A8MV23 424 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 OOSP1A8MZH6 123 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 TRDCB7Z8K6 153 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 GABARAPO95166 117 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 PTHLHP12272 177 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 BRS3P32247 399 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 MNDAP41218 407 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 OR3A3P47888 321 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF816Q0VGE8 651 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ARFRP1Q13795 201 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 TMEM30BQ3MIR4 351 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 IGSF11Q5DX21 431 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 HIST2H2BDQ6DRA6 164 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 MOB3BQ86TA1 216 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 OR6Q1Q8NGQ2 317 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 NUDCD2Q8WVJ2 157 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 RTN4IP1Q8WWV3 396 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ABHD14AQ9BUJ0 271 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 IFI27L2Q9H2X8 130 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 C16orf95Q9H693 158 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF702PQ9H963 129 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 BEX1Q9HBH7 125 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ABRACLQ9P1F3 81 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 SLC23A1Q9UHI7 598 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 ETV7Q9Y603 341 aa7.75□□□□□ -1.17
HDAC3-208ENST00000476739 TRAV18A0A075B6X5 111 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SAA2-SAA4A0A096LPE2 208 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 HAX1O00165 279 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 FABP7O15540 132 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SSX5O60225 188 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SNAPC5O75971 98 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 IGKV1D-33P01593 117 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 IGKV1-33P01594 117 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 GAPDHP04406 335 aaKnown RBP7.74□□□□□ -1.17
HDAC3-208ENST00000476739 AMY1AP04745 511 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 AMY2AP04746 511 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SAA2P0DJI9 122 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-208ENST00000476739 RCVRNP35243 200 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 CEACAM6P40199 344 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 RAB7AP51149 207 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 ZNF137PP52743 207 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SCAND1P57086 179 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 PROK1P58294 105 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 HNF4GQ14541 408 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 TMEM95Q3KNT9 176 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 LY6G6FQ5SQ64 297 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 HACD4Q5VWC8 232 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 CCDC144NLQ6NUI1 221 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 OR8H3Q8N146 312 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 LHFPL5Q8TAF8 219 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 WFDC12Q8WWY7 111 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 RBM14Q96PK6 669 aaKnown RBP7.74□□□□□ -1.17
HDAC3-208ENST00000476739 AGMATQ9BSE5 352 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 SLC25A33Q9BSK2 321 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 C11orf54Q9H0W9 315 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-208ENST00000476739 RAB18Q9NP72 206 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 PITPNC1Q9UKF7 332 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
HDAC3-208ENST00000476739 TENM1Q9UKZ4 2725 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 PROP1O75360 226 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 RGS11O94810 467 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 OR2F2O95006 317 aa7.73□□□□□ -1.17
HDAC3-208ENST00000476739 EIF4EP06730 217 aaKnown RBP7.73□□□□□ -1.17
HDAC3-208ENST00000476739 GSTP1P09211 210 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms