RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PRR30Q53SZ7 412 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 C6orf15Q6UXA7 325 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 LHFPL2Q6ZUX7 228 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 TCF23Q7RTU1 214 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PACRGQ96M98 296 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ASCL2Q99929 193 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 OR51I2Q9H344 312 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 PLEKHF2Q9H8W4 249 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 GPR35Q9HC97 309 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 CYTL1Q9NRR1 136 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 TCFL5Q9UL49 500 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 S4R3C0 116 aa4.27□□□□□ -1.73
CCDC39-204ENST00000476379 ZANQ9Y493 2812 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ITPR2Q14571 2701 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 DSCAML1Q8TD84 2053 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 TUBAL3A6NHL2 446 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 LDLRAD4O15165 306 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZG16O60844 167 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 CTSDP07339 412 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MYOD1P15172 320 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SNCAP37840 140 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 CASP6P55212 293 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 RAC1P63000 192 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF90Q03938 601 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SLC25A47Q6Q0C1 308 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MDP1Q86V88 176 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 LYG1Q8N1E2 194 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 FAM216AQ8WUB2 273 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 BLNKQ8WV28 456 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 LURAP1Q96LR2 239 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF251Q9BRH9 671 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 UCK1Q9HA47 277 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 PLEKHA2Q9HB19 425 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 CACFD1Q9UGQ2 172 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 CHCHD2Q9Y6H1 151 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ARHGAP32A7KAX9 2087 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZFHX3Q15911 3703 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MUC21A0A0G2JKD1 596 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MUC21A0A140T8X8 626 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 BTBD17A6NE02 478 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SPINT2O43291 252 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IFNA1P01562 189 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 CSN3P07498 182 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR5G3P0C626 314 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 TRGC1P0CF51 173 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF17P17021 662 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IGFBP3P17936 291 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 PSMB3P49720 205 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 RAB7AP51149 207 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SOX8P57073 446 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 HBG1P69891 147 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 HBG2P69892 147 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 FAM3AP98173 230 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MRPL49Q13405 166 aaKnown RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 PLGLAQ15195 96 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 RAB35Q15286 201 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 Q5PR19 223 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MUC21Q5SSG8 566 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF385CQ66K41 422 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF439Q8NDP4 499 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR10P1Q8NGE3 313 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 Q8WTZ3 238 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 GPR146Q96CH1 333 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MOB1AQ9H8S9 216 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SLC17A5Q9NRA2 495 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 GLRX2Q9NS18 164 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 A0A0G2JRQ6 117 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 FIGNL2A6NMB9 653 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 RAMP3O60896 148 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 NPIPB7O75200 414 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 DFFBO76075 338 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 IRF2P14316 349 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 KITLGP21583 273 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 PMELP40967 661 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 GALR1P47211 349 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 MEOX1P50221 254 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SULT1A2P50226 295 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SLC10A1Q14973 349 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 DEGS2Q6QHC5 323 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 C5orf46Q6UWT4 87 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 WFDC8Q8IUA0 241 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ABHD12Q8N2K0 398 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR10G4Q8NGN3 311 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR10G9Q8NGN4 311 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR10G7Q8NGN6 311 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM171Q8WVE6 324 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OR4C12Q96R67 309 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 WNT5BQ9H1J7 359 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 OPN3Q9H1Y3 402 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-204ENST00000476379 ZNRD1Q9P1U0 126 aa4.26□□□□□ -1.73
CCDC39-204ENST00000476379 SLC22A20A6NK97 555 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms