RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-210ENST00000475329 CCL3L1P16619 93 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
TRAF4-210ENST00000475329 CATR1Q13166 79 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 Q3ZCU0 254 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 WDR25Q64LD2 544 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-210ENST00000475329 HEPN1Q6WQI6 88 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 IL22RA2Q969J5 263 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 ABHD14AQ9BUJ0 271 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 NMES1Q9C002 83 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
TRAF4-210ENST00000475329 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF16P17020 682 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-210ENST00000475329 DLX6P56179 175 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 FGL1Q08830 312 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-210ENST00000475329 Q5BKY6 102 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 GGNBP1Q5YKI7 109 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
TRAF4-210ENST00000475329 LEAP2Q969E1 77 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 C5orf30Q96GV9 206 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 AGMATQ9BSE5 352 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
TRAF4-210ENST00000475329 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 MPTX1A8MV57 137 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 SLC31A2O15432 143 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 MMP23AO75900 390 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 CDS2O95674 445 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 SERPINE2P07093 398 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 GNG10P50151 68 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 PDLIM4P50479 330 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 GNB2P62879 340 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-210ENST00000475329 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 SELENOHQ8IZQ5 122 aaKnown RBP11.29□□□□□ -0.6
TRAF4-210ENST00000475329 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 OR10C1Q96KK4 312 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 HSD17B10Q99714 261 aaKnown RBP11.29□□□□□ -0.6
TRAF4-210ENST00000475329 NARFLQ9H6Q4 476 aa11.29□□□□□ -0.6
TRAF4-210ENST00000475329 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-210ENST00000475329 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 RBP4P02753 201 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF134P52741 427 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 LRRC37A5PQ49AS3 106 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 ESCO2Q56NI9 601 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 CT45A1Q5HYN5 189 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
TRAF4-210ENST00000475329 C9orf62Q8N4C0 152 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 ZNF525Q8N782 197 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 DRAXINQ8NBI3 349 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-210ENST00000475329 CT45A3Q8NHU0 189 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 PPP1R1CQ8WVI7 109 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 SPIN2AQ99865 258 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 SPIN2BQ9BPZ2 258 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 SSBP3Q9BWW4 388 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-210ENST00000475329 FAM212BQ9NTI7 297 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-210ENST00000475329 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
TRAF4-210ENST00000475329 FXYD6-FXYD2A0A087WZ82 144 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 PPIAL4CA0A0B4J2A2 164 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 M0R1X1 148 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 RAB29O14966 203 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 PPIAL4GP0DN37 164 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 RPA2P15927 270 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 RPL30P62888 115 aaKnown RBP11.27□□□□□ -0.61
TRAF4-210ENST00000475329 UTF1Q5T230 341 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-210ENST00000475329 GSKIPQ9P0R6 139 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 SESN1Q9Y6P5 492 aa11.27□□□□□ -0.61
TRAF4-210ENST00000475329 FLNBO75369 2602 aaKnown RBP11.26□□□□□ -0.61
TRAF4-210ENST00000475329 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 A0A087X0M5 115 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1B0GX30 115 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 hCG_1809904A0A1W2PP81 198 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1W2PPE2 198 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1W2PR64 198 aa11.26□□□□□ -0.61
TRAF4-210ENST00000475329 A0A1W2PRV1 198 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms