RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 FAM131AQ6UXB0 335 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 Q8N402 240 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 OR52L2PQ8NGH6 319 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 OR9G4Q8NGQ1 327 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 RGP1Q92546 391 aaPredicted RBP9.63□□□□□ -0.87
SKA3-206ENST00000475251 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
SKA3-206ENST00000475251 STEAP1Q9UHE8 339 aa9.63□□□□□ -0.87
SKA3-206ENST00000475251 SHISA3A0PJX4 238 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 SAC3D1A6NKF1 404 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 H7C2Y5 167 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 RAB29O14966 203 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 SLC22A1O15245 554 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 FUT3P21217 361 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 OR3A3P47888 321 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 C1orf146Q5VVC0 180 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 LFNGQ8NES3 379 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 RDH12Q96NR8 316 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 ZNF355PQ9NSJ1 428 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 SIGLEC8Q9NYZ4 499 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 ABRACLQ9P1F3 81 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 WASHC3Q9Y3C0 194 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 RPL36Q9Y3U8 105 aaKnown RBP9.62□□□□□ -0.87
SKA3-206ENST00000475251 CEPT1Q9Y6K0 416 aa9.62□□□□□ -0.87
SKA3-206ENST00000475251 GPX5O75715 221 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 ALPLP05186 524 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 EGR2P11161 476 aaPredicted RBP9.61□□□□□ -0.87
SKA3-206ENST00000475251 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
SKA3-206ENST00000475251 KLF5Q13887 457 aaPredicted RBP9.61□□□□□ -0.87
SKA3-206ENST00000475251 AWAT2Q6E213 333 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 GLIPR1L1Q6UWM5 242 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 POC5Q8NA72 575 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
SKA3-206ENST00000475251 SELENOIQ9C0D9 397 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 IFI27L2Q9H2X8 130 aa9.61□□□□□ -0.87
SKA3-206ENST00000475251 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
SKA3-206ENST00000475251 UBE2QL1A1L167 161 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 FCN1O00602 326 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 SPDEFO95238 335 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 CA2P00918 260 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 MGMTP16455 207 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 IGFBP3P17936 291 aaPredicted RBP9.6□□□□□ -0.87
SKA3-206ENST00000475251 AADACP22760 399 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 C6orf141Q5SZD1 244 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 RNLSQ5VYX0 342 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 TMPRSS11AQ6ZMR5 421 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 LAX1Q8IWV1 398 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 CDH26Q8IXH8 852 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 JAGN1Q8N5M9 183 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 MRPL30Q8TCC3 161 aaKnown RBP9.6□□□□□ -0.87
SKA3-206ENST00000475251 GHSRQ92847 366 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 MUL1Q969V5 352 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 SMIM19Q96E16 107 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 TSNAXQ99598 290 aaKnown RBP9.6□□□□□ -0.87
SKA3-206ENST00000475251 THAP7Q9BT49 309 aaPredicted RBP9.6□□□□□ -0.87
SKA3-206ENST00000475251 KRTAP17-1Q9BYP8 105 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 PEMTQ9UBM1 199 aa9.6□□□□□ -0.87
SKA3-206ENST00000475251 H0YJW9 148 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 EI24O14681 340 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 PDCD6O75340 191 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CRTAPO75718 401 aaPredicted RBP9.59□□□□□ -0.87
SKA3-206ENST00000475251 TPPPO94811 219 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CNIH1O95406 144 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 GABRB1P18505 474 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 FSTP19883 344 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 RASSF2P50749 326 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 ALDH3A2P51648 485 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 SYNJ2BPP57105 145 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 HMGN3Q15651 99 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 ZIK1Q3SY52 487 aaPredicted RBP9.59□□□□□ -0.87
SKA3-206ENST00000475251 DMKNQ6E0U4 476 aaPredicted RBP9.59□□□□□ -0.87
SKA3-206ENST00000475251 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 OR52I1Q8NGK6 324 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 IL1F10Q8WWZ1 152 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 AMBNQ9NP70 447 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 MRPS18AQ9NVS2 196 aaKnown RBP9.59□□□□□ -0.87
SKA3-206ENST00000475251 SLC2A8Q9NY64 477 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
SKA3-206ENST00000475251 SLC23A1Q9UHI7 598 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 GAB2Q9UQC2 676 aa9.59□□□□□ -0.87
SKA3-206ENST00000475251 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 AIREO43918 545 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 OR2A4O95047 310 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 LIMS3P0CW19 117 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 LIMS4P0CW20 117 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 CPEP16870 476 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 CAPGP40121 348 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 CD81P60033 236 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 FXYD3Q14802 87 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 PSG5Q15238 335 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 RPEL1Q2QD12 228 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 Q499Y3 187 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms