RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 LINC00205P59089 165 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 KIR2DS1Q14954 304 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 TMEM30BQ3MIR4 351 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 PLA1AQ53H76 456 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 RNASE12Q5GAN4 147 aaKnown RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 TPTE2P1Q5T6R2 138 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF660Q6AZW8 331 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 CCBE1Q6UXH8 406 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 CFHR4Q92496 578 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 MALSU1Q96EH3 234 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ABHD14BQ96IU4 210 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 SDHCQ99643 169 aaPredicted RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 ABHD14AQ9BUJ0 271 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 SCPEP1Q9HB40 452 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 RDH8Q9NYR8 311 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 MTFP1Q9UDX5 166 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 RNF150Q9ULK6 438 aa5.61□□□□□ -1.51
LIMD1-204ENST00000474665 RBMX2Q9Y388 322 aaKnown RBP5.61□□□□□ -1.51
LIMD1-204ENST00000474665 SAA2-SAA4A0A096LPE2 208 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 FAM90A9PA6NNJ1 464 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 LEUTXA8MZ59 168 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 CLDN34H7C241 214 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 SULT1C2O00338 296 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 TOR1AO14656 332 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 CTDSPLO15194 276 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 CHST1O43916 411 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 FBP1P09467 338 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 SAA2P0DJI9 122 aaPredicted RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 NFYAP23511 347 aaPredicted RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 ZBTB25P24278 435 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 HLA-DMAP28067 261 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 CBX5P45973 191 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 REG1BP48304 166 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 DYNLT3P51808 116 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 LGALS4P56470 323 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 UBA52P62987 128 aaKnown RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 MRPS15P82914 257 aaKnown RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 BAMBIQ13145 260 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 AANATQ16613 207 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 RPL39P5Q59GN2 51 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF833PQ6ZTB9 187 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 OVCH2Q7RTZ1 564 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 LYG1Q8N1E2 194 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 DRAM1Q8N682 238 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 OR4D10Q8NGI6 311 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 OR10X1Q8NGY0 326 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 SMIM4Q8WVI0 70 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 RTN4IP1Q8WWV3 396 aaPredicted RBP5.6□□□□□ -1.51
LIMD1-204ENST00000474665 SSX3Q99909 188 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 CHIAQ9BZP6 476 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 RAB9BQ9NP90 201 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 FAM96BQ9Y3D0 163 aa5.6□□□□□ -1.51
LIMD1-204ENST00000474665 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 IGHV3-72A0A0B4J1Y9 119 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 IGHV1-3A0A0C4DH29 117 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 A6NDX4 124 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 FABP12A6NFH5 140 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OOSP1A8MZH6 123 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 H3BUX3 64 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 GABARAPH6UMI1 98 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 HSD17B6O14756 317 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 TIMM23O14925 209 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 HSPA12AO43301 675 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 GSTZ1O43708 216 aaPredicted RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 PMP2P02689 132 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CD74P04233 296 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 AMY1AP04745 511 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 AMY2AP04746 511 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 RNASE1P07998 156 aaKnown RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CTXN2P0C2S0 81 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR8U9P0C7N5 309 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CT45A6P0DMU7 189 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CT45A5P0DMU8 189 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CT45A7P0DMV0 189 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR5H8P0DN80 308 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 AADACP22760 399 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 FCGR2CP31995 323 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 HRH1P35367 487 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 RELBQ01201 579 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 EIF4EBP1Q13541 118 aaPredicted RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 IL18Q14116 193 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 LRRC75BQ2VPJ9 315 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 PYHIN1Q6K0P9 492 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 DHRS11Q6UWP2 260 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 C1QL4Q86Z23 238 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR2AK2Q8NG84 335 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR5AP2Q8NGF4 316 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR8U1Q8NH10 309 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR56B4Q8NH76 319 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 OR10J5Q8NHC4 309 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 ZNF418Q8TF45 676 aaPredicted RBP5.59□□□□□ -1.51
LIMD1-204ENST00000474665 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 SSMEM1Q8WWF3 244 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 TRIM63Q969Q1 353 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 ZDHHC16Q969W1 377 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 CREB3L1Q96BA8 519 aa5.59□□□□□ -1.51
LIMD1-204ENST00000474665 RITA1Q96K30 269 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms