RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 FGF9P31371 208 aaPredicted RBP16.18■□□□□ 0.18
SNX13-206ENST00000474067 CLDN12P56749 244 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 ACTBP60709 375 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 RPL23AP62750 156 aaKnown RBP16.18■□□□□ 0.18
SNX13-206ENST00000474067 TCTEX1D4Q5JR98 221 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 ZNF329Q86UD4 541 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 SPARTQ8N0X7 666 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 OR4A4PQ8NGN8 299 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 RNF5Q99942 180 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 NABP2Q9BQ15 211 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 ZNF107Q9UII5 783 aaPredicted RBP16.18■□□□□ 0.18
SNX13-206ENST00000474067 STUB1Q9UNE7 303 aa16.18■□□□□ 0.18
SNX13-206ENST00000474067 A0A0A6YYD4 124 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 TMEM272A0A1B0GTI8 110 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 FOXI3A8MTJ6 420 aaPredicted RBP16.17■□□□□ 0.18
SNX13-206ENST00000474067 TRDCB7Z8K6 153 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 LDLRAD4O15165 306 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 NBR2O15453 112 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 PLXNB1O43157 2135 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 TALDO1P37837 337 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 CEACAM6P40199 344 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 FAM53AQ6NSI3 398 aaPredicted RBP16.17■□□□□ 0.18
SNX13-206ENST00000474067 ODF3L1Q8IXM7 274 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 OR10R2Q8NGX6 335 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 NOL4LQ96MY1 436 aaPredicted RBP16.17■□□□□ 0.18
SNX13-206ENST00000474067 MRPL20Q9BYC9 149 aaKnown RBP16.17■□□□□ 0.18
SNX13-206ENST00000474067 IFI27L2Q9H2X8 130 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 PLSCR3Q9NRY6 295 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 NECAP2Q9NVZ3 263 aa16.17■□□□□ 0.18
SNX13-206ENST00000474067 IGF1P05019 195 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 MYCNOSP40205 109 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 FOXE3Q13461 319 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 HIST2H2BDQ6DRA6 164 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 C22orf42Q6IC83 251 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 ZNF773Q6PK81 442 aa16.16■□□□□ 0.18
SNX13-206ENST00000474067 NOTOA8MTQ0 251 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 ZNF736B4DX44 427 aaPredicted RBP16.15■□□□□ 0.18
SNX13-206ENST00000474067 ST8SIA5O15466 376 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 HLA-DRB1P01911 266 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 GSTP1P09211 210 aaKnown RBP16.15■□□□□ 0.18
SNX13-206ENST00000474067 TMEM50BP56557 158 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 ZNF695Q8IW36 515 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.15■□□□□ 0.18
SNX13-206ENST00000474067 KLHL30-AS1Q8NEE0 82 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
SNX13-206ENST00000474067 H7C2Y5 167 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 APOA2P02652 100 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 TAGLNQ01995 201 aaKnown RBP16.14■□□□□ 0.17
SNX13-206ENST00000474067 CBX3Q13185 183 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 ARFRP1Q13795 201 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 PLGLAQ15195 96 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 SRSF7Q16629 238 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX13-206ENST00000474067 LIN54Q6MZP7 749 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 TMEM65Q6PI78 240 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 NPBQ8NG41 125 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 OR8U1Q8NH10 309 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 OR10J5Q8NHC4 309 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 VCX3AQ9NNX9 186 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 RNF150Q9ULK6 438 aa16.14■□□□□ 0.17
SNX13-206ENST00000474067 MEGF8Q7Z7M0 2845 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 FABP7O15540 132 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 TMEM127O75204 238 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 HIST1H1DP16402 221 aaKnown RBP16.13■□□□□ 0.17
SNX13-206ENST00000474067 OR3A3P47888 321 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 F2RL1P55085 397 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 SCAND1P57086 179 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 PITPNAQ00169 270 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 C5orf64Q2M2E5 130 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 TIMM50Q3ZCQ8 353 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 OXLD1Q5BKU9 147 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 PLAC9Q5JTB6 97 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 C10orf99Q6UWK7 81 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 TCTEX1D1Q8N7M0 179 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 KCTD7Q96MP8 289 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 HDHD3Q9BSH5 251 aaPredicted RBP16.13■□□□□ 0.17
SNX13-206ENST00000474067 TXNL4BQ9NX01 149 aaKnown RBP16.13■□□□□ 0.17
SNX13-206ENST00000474067 LINC00527Q9UJ94 153 aa16.13■□□□□ 0.17
SNX13-206ENST00000474067 NDUFA3O95167 84 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 IGHG4P01861 327 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 SCTP09683 121 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 SLC2A2P11168 524 aaPredicted RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 CDX1P47902 265 aaPredicted RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 THBS3P49746 956 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 OR10A3P58181 314 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 TMEM267Q0VDI3 215 aaPredicted RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 RNF152Q8N8N0 203 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 TSNAXQ99598 290 aaKnown RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 AGMATQ9BSE5 352 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 C11orf54Q9H0W9 315 aaPredicted RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 ATG5Q9H1Y0 275 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 OR51J1Q9H342 316 aa16.12■□□□□ 0.17
SNX13-206ENST00000474067 RBM7Q9Y580 266 aaKnown RBP16.12■□□□□ 0.17
SNX13-206ENST00000474067 MFNGO00587 321 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 SPDEFO95238 335 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 TFAP2AP05549 437 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 FCGR3AP08637 254 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 CD40LGP29965 261 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 DCTN2Q13561 401 aaKnown RBP16.11■□□□□ 0.17
SNX13-206ENST00000474067 KCTD21Q4G0X4 260 aa16.11■□□□□ 0.17
SNX13-206ENST00000474067 ZNF660Q6AZW8 331 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms