RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 FAM206AQ9NX38 181 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 RARRES3Q9UL19 164 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 MED31Q9Y3C7 131 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 TSSC4Q9Y5U2 329 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 PLXNB3Q9ULL4 1909 aa4.36□□□□□ -1.71
TMEM39A-206ENST00000473684 SPAARA0A1B0GVQ0 90 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 A6NDN8 102 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TNFRSF13BO14836 293 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LATO43561 262 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 CLDN1O95832 211 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TTRP02766 147 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 CFIP05156 583 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TAS2R46P59540 309 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ELAVL3Q14576 367 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF74Q16587 644 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM110CQ1W6H9 321 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 AGTRAPQ6RW13 159 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LGI3Q8N145 548 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LRTM2Q8N967 370 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 OR2K2Q8NGT1 345 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ABHD14BQ96IU4 210 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LINC00615Q96LM1 132 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 C4orf45Q96LM5 186 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ABT1Q9ULW3 272 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 UBE2J1Q9Y385 318 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 IER3IP1Q9Y5U9 82 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 A4D1N5 150 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ADM5C9JUS6 153 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 H3BRM9 83 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TNFP01375 233 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 GYPAP02724 150 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 WNT2P09544 360 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 H2BFMP0C1H6 154 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 IGFBP3P17936 291 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 CCKBRP32239 447 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ID1P41134 155 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LCN15Q6UWW0 184 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PRRT2Q7Z6L0 340 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 OR4N5Q8IXE1 308 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM86AQ8N2M4 240 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 Q8TCH9 128 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PCED1BQ96HM7 432 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ULBP2Q9BZM5 246 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF665Q9H7R5 613 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PLEKHF2Q9H8W4 249 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 POLR1DQ9Y2S0 133 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 UFC1Q9Y3C8 167 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 LOC102725191A0A1B0GVB3 256 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PRR32B1ATL7 298 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 NGFRP08138 427 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 IGLL1P15814 213 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 HIST1H1CP16403 213 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 ZNF17P17021 662 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 FUT1P19526 365 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 BSGP35613 385 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 REG1BP48304 166 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 POU3F1Q03052 451 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 IGFBP7Q16270 282 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 CLEC12BQ2HXU8 276 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 OR6K6Q8NGW6 343 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 OR10AC1Q8NH08 325 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 OR4A5Q8NH83 315 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 PFN4Q8NHR9 129 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 SGMS2Q8NHU3 365 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 MBD3L2Q8NHZ7 208 aaPredicted RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM171Q8WVE6 324 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 DNAJA3Q96EY1 480 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 C5orf30Q96GV9 206 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TSSK2Q96PF2 358 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 FAM103A1Q9BTL3 118 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 STRADBQ9C0K7 418 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 C20orf141Q9NUB4 165 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 HSPB8Q9UJY1 196 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TMEM14AQ9Y6G1 99 aa4.35□□□□□ -1.71
TMEM39A-206ENST00000473684 TNRC18O15417 2968 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 TRAV27A0A087WT01 109 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 TEX48A0A1B0GUV7 120 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 hCG_38984A0A1B0GV85 526 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 WIPF3A6NGB9 483 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 CRYM-AS1A6NIL9 109 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 F5H697 171 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 MLNRO43193 412 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 ERI3O43414 337 aaKnown RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 XRCC2O43543 280 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 NDUFB2O95178 105 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 CA2P00918 260 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 ADH4P08319 380 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 SMIM10L1P0DMW3 83 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 PSG2P11465 335 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 PGCP20142 388 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 HOXD9P28356 352 aaPredicted RBP4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 GRPRP30550 384 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 NTSR1P30989 418 aa4.34□□□□□ -1.71
TMEM39A-206ENST00000473684 RGRP47804 291 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms