RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 C17orf58Q2M2W7 97 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 C1orf229Q6ZS94 237 aaPredicted RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 RNASE11Q8TAA1 199 aaKnown RBP5.16□□□□□ -1.58
CLK1-210ENST00000473565 PPP1R35Q8TAP8 253 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 LURAP1Q96LR2 239 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 LRRC30A6NM36 301 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 LINC00473A8K010 186 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 C17orf98A8MV24 154 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SSSCA1O60232 199 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 PROP1O75360 226 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 IGKV1-5P01602 117 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 PRB1P04280 392 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SFTPCP11686 197 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CCL3L1P16619 93 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 C4BPBP20851 252 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 COL8A2P25067 703 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 PLA2G5P39877 138 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 GNG10P50151 68 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 BRWD1-AS2P59051 145 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF345Q14585 488 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF273Q14593 569 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 NDUFA5Q16718 116 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 RPL39P5Q59GN2 51 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 NMSQ5H8A3 153 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 PRAMEF5Q5TYX0 476 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SLC51BQ86UW2 128 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF561Q8N587 486 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 OR4D5Q8NGN0 318 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ERGIC1Q969X5 290 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 GPR146Q96CH1 333 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 ZNF665Q9H7R5 613 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CYTL1Q9NRR1 136 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 C19orf12Q9NSK7 152 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 SDHAF2Q9NX18 166 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 CTSZQ9UBR2 303 aa5.16□□□□□ -1.58
CLK1-210ENST00000473565 DOPEY1Q5JWR5 2465 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 PPIAL4EA0A075B759 164 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 VSTM5A8MXK1 200 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 PPIAL4DF5H284 164 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 LGALS8O00214 317 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 SIGLEC5O15389 551 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 ADH4P08319 380 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 PPIAL4FP0DN26 164 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 LYL1P12980 280 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 RPL12P30050 165 aaKnown RBP5.15□□□□□ -1.58
CLK1-210ENST00000473565 AKR1C2P52895 323 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 DLX1P56177 255 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 LOXL3P58215 753 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 SMCO1Q147U7 214 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 ZNF672Q499Z4 452 aaPredicted RBP5.15□□□□□ -1.58
CLK1-210ENST00000473565 FAM209AQ5JX71 171 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 AVPI1Q5T686 147 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 C1QTNF12Q5T7M4 302 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 TEX36Q5VZQ5 186 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 RPL7L1Q6DKI1 246 aaKnown RBP5.15□□□□□ -1.58
CLK1-210ENST00000473565 ZNF645Q8N7E2 425 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 DMBX1Q8NFW5 382 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 OR5D13Q8NGL4 314 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 TCTEX1D2Q8WW35 142 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 H1FXQ92522 213 aaKnown RBP5.15□□□□□ -1.58
CLK1-210ENST00000473565 C14orf79Q96F83 325 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 ARPC5LQ9BPX5 153 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 AGMATQ9BSE5 352 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 GSX2Q9BZM3 304 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 PPIAL4AQ9Y536 164 aa5.15□□□□□ -1.58
CLK1-210ENST00000473565 IGHV1-69-2A0A0G2JMI3 117 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 B9A039 149 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 H3BP45 60 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 TMEM50AO95807 157 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 KRASP01116 189 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 NMBP08949 121 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 MUC1P15941 1255 aaPredicted RBP5.15□□□□□ -1.59
CLK1-210ENST00000473565 VDAC1P21796 283 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 S100GP29377 79 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 LPAR6P43657 344 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 NKX2-1P43699 371 aaPredicted RBP5.15□□□□□ -1.59
CLK1-210ENST00000473565 NHLH2Q02577 135 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 SWI5Q1ZZU3 235 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 MORN2Q502X0 79 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 ITLN2Q8WWU7 325 aaPredicted RBP5.15□□□□□ -1.59
CLK1-210ENST00000473565 DIRC2Q96SL1 478 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 MS4A5Q9H3V2 200 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 SLC25A10Q9UBX3 287 aaPredicted RBP5.15□□□□□ -1.59
CLK1-210ENST00000473565 CACNG5Q9UF02 275 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 FBXL17Q9UF56 701 aa5.15□□□□□ -1.59
CLK1-210ENST00000473565 WNK2Q9Y3S1 2297 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 FAM24AA6NFZ4 105 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 ST8SIA3O43173 380 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 B3GALNT1O75752 331 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 S1PR2O95136 353 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 SOD3P08294 240 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 PET100P0DJ07 73 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CGB3P0DN86 165 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 CGB7P0DN87 165 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 GZMHP20718 246 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 G6PCP35575 357 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 NUP62P37198 522 aaPredicted RBP5.14□□□□□ -1.59
CLK1-210ENST00000473565 SRPXP78539 464 aa5.14□□□□□ -1.59
CLK1-210ENST00000473565 NCR3LG1Q68D85 454 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms