RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 RPUSD4Q96CM3 377 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 PRO1933Q9H354 126 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZNF581Q9P0T4 197 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ASPMQ8IZT6 3477 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 IGKV1-6A0A0C4DH72 117 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CCDC163A0A0D9SF12 145 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 A0A1W2PPQ1 181 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 FAM90A9PA6NNJ1 464 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 A8MXE2 369 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZNF16P17020 682 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 CDC34P49427 236 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 CYB561P49447 251 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 FGF8P55075 233 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 ERVFC1-1P60608 527 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZFP36L1Q07352 338 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 FOXL1Q12952 345 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 PDCD1Q15116 288 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZNF726P1Q15940 193 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 ZNF124Q15973 351 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 GABRA6Q16445 453 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 FFAR4Q5NUL3 377 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 IL1F10Q8WWZ1 152 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 APH1AQ96BI3 265 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CYYR1Q96J86 154 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 PRRG4Q9BZD6 226 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CABIN1Q9Y6J0 2220 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 LOC400499M0QZD8 3231 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 TMEM30CPA0ZSE6 113 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TMEM210A6NLX4 147 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 B4E171 279 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 SS18L1O75177 396 aaPredicted RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 UMODP07911 640 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CCNOP22674 350 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TSPAN7P41732 249 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CXCL12P48061 93 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 NUBP1P53384 320 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 FOXL2P58012 376 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TPPP2P59282 170 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 UBE2NP61088 152 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 NUTF2P61970 127 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 Q6ZPA2 131 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 TIPARPQ7Z3E1 657 aaKnown RBP5.2□□□□□ -1.58
HERC4-209ENST00000473533 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 FKBP11Q9NYL4 201 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 WNT16Q9UBV4 365 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 WIPI2Q9Y4P8 454 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 SVILO95425 2214 aa5.2□□□□□ -1.58
HERC4-209ENST00000473533 CACNA1GO43497 2377 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TRBV9A0A0B4J1U6 114 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 A0A1W2PPV4 95 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 ZNF891A8MT65 544 aaPredicted RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 NXPH3O95157 252 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 PATE4P0C8F1 98 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 GNB2P62879 340 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 VWC2Q2TAL6 325 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 ZNF497Q6ZNH5 498 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 GBGT1Q8N5D6 347 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 RDH5Q92781 318 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 FAM173AQ9BQD7 235 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 ZPBPQ9BS86 351 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 PPP1R3CQ9UQK1 317 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TRAPPC1Q9Y5R8 145 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TNRC6AQ8NDV7 1962 aaKnown RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 TRAV24A0A0B4J272 114 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 A0A0G2JRQ6 117 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 LRRC3CA6NJW4 275 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 HS3ST1O14792 307 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 CLDN14O95500 239 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 KRASP01116 189 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 IGKV1-5P01602 117 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 ERVS71-1P61550 626 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 PAX5Q02548 391 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 C1orf194Q5T5A4 169 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 OR8G2PQ6IF36 304 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 FGFRL1Q8N441 504 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 CPEB3Q8NE35 698 aaKnown RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 IFI44Q8TCB0 444 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 SAP25Q8TEE9 199 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 GALMQ96C23 342 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 R3HDM4Q96D70 268 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 RAB9BQ9NP90 201 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 MBNL3Q9NUK0 354 aaKnown RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 RFNGQ9Y644 331 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 UNC13CQ8NB66 2214 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 OOEPA6NGQ2 149 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 LRRC30A6NM36 301 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 C11orf94C9JXX5 98 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 HSPB6O14558 160 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 MZT1Q08AG7 82 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TESK1Q15569 626 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 TBC1D28Q2M2D7 210 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 H2BFWTQ7Z2G1 175 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 RPP25LQ8N5L8 163 aaKnown RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 DTD1Q8TEA8 209 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 WDYHV1Q96HA8 205 aa5.19□□□□□ -1.58
HERC4-209ENST00000473533 HSD17B10Q99714 261 aaKnown RBP5.19□□□□□ -1.58
HERC4-209ENST00000473533 PCGF1Q9BSM1 259 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms