RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MEX3AA1L020 520 aaKnown RBP12.08□□□□□ -0.48
HIF3A-206ENST00000472815 ATG12O94817 140 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 PSMB6P28072 239 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 Q3ZCU0 254 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 HEPN1Q6WQI6 88 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 PARP12Q9H0J9 701 aaKnown RBP12.08□□□□□ -0.48
HIF3A-206ENST00000472815 C19orf12Q9NSK7 152 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 FAM212BQ9NTI7 297 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-206ENST00000472815 CTSZQ9UBR2 303 aa12.08□□□□□ -0.48
HIF3A-206ENST00000472815 G3V3Q6 166 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 SLC25A4P12235 298 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF16P17020 682 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-206ENST00000472815 OMGP23515 440 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 NFYBP25208 207 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 CDKN1AP38936 164 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 SMCO1Q147U7 214 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 LRRC37A5PQ49AS3 106 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 C11orf87Q6NUJ2 197 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-206ENST00000472815 OR11H4Q8NGC9 324 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
HIF3A-206ENST00000472815 RNF150Q9ULK6 438 aa12.07□□□□□ -0.48
HIF3A-206ENST00000472815 ST8SIA5O15466 376 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 RLN2P04090 185 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 COX6B1P14854 86 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 VDAC1P21796 283 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 GPR6P46095 362 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 YLPM1P49750 1951 aaKnown RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 AVPI1Q5T686 147 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 THOC7Q6I9Y2 204 aaKnown RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 TCF23Q7RTU1 214 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 CD300LFQ8TDQ1 290 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 WDR89Q96FK6 387 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 GAB2Q9UQC2 676 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 USP9YO00507 2555 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 hCG_1809904A0A1W2PP81 198 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 A0A1W2PPE2 198 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 A0A1W2PR64 198 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 A0A1W2PRV1 198 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 L7N2F9 121 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 MPC2O95563 127 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 NUP62P37198 522 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF273Q14593 569 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 Q5BKY6 102 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF546Q86UE3 836 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 RNASE11Q8TAA1 199 aaKnown RBP12.06□□□□□ -0.48
HIF3A-206ENST00000472815 GRPEL2Q8TAA5 225 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 CCL19Q99731 98 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 GON7Q9BXV9 100 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 SDHAF2Q9NX18 166 aa12.06□□□□□ -0.48
HIF3A-206ENST00000472815 OVOL3O00110 214 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 RAB29O14966 203 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 CLDN1O95832 211 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-206ENST00000472815 INO80EQ8NBZ0 244 aaPredicted RBP12.05□□□□□ -0.48
HIF3A-206ENST00000472815 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 ABHD14BQ96IU4 210 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
HIF3A-206ENST00000472815 HRNRQ86YZ3 2850 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-206ENST00000472815 A1L4Q6 167 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 ARPC5O15511 151 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 LY6HO94772 140 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 RBP4P02753 201 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 PRAMEF5Q5TYX0 476 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 FGFRL1Q8N441 504 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 LHFPL5Q8TAF8 219 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
HIF3A-206ENST00000472815 GPHA2Q96T91 129 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 S1PR3Q99500 378 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
HIF3A-206ENST00000472815 PRELID3BQ9Y3B1 194 aa12.04□□□□□ -0.48
HIF3A-206ENST00000472815 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 A0A0D9SG52 128 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 SLC25A6P12236 298 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 KIR2DS2P43631 304 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 AKR1C2P52895 323 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 S100A10P60903 97 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 GNB2P62879 340 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 WDR25Q64LD2 544 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 LAMTOR1Q6IAA8 161 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 PRSS54Q6PEW0 395 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 ZNF841Q6ZN19 808 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 SLC25A48Q6ZT89 311 aaKnown RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
HIF3A-206ENST00000472815 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
HIF3A-206ENST00000472815 MFFQ9GZY8 342 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms