RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 IGKV1-16P04430 117 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 CRYBA1P05813 215 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 CD7P09564 240 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 CD99P14209 185 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 HSPA9P38646 679 aaKnown RBP1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 ZNF140P52738 457 aaPredicted RBP1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 H2BFSP57053 126 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 LINC00313P59037 77 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 TSPEAR-AS2P59090 65 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 FGF12P61328 243 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 DEFB103AP81534 67 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 MESTQ5EB52 335 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 ATP5L2Q7Z4Y8 100 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 PLCZ1Q86YW0 608 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 OR7G1Q8NGA0 311 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 CYGBQ8WWM9 190 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 OR7D2Q96RA2 312 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 TBX5Q99593 518 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 DCUN1D5Q9BTE7 237 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 FAM206AQ9NX38 181 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 HHLA2Q9UM44 414 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 PSMD13Q9UNM6 376 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 TMEM94Q12767 1356 aa1.94□□□□□ -2.1
PRPF40A-208ENST00000472760 C19orf71A6NCJ1 209 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 ZW10O43264 779 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 CALUO43852 315 aaPredicted RBP1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 IGLV3-27P01718 113 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 LINC00614P0C842 121 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 OCMP0CE72 109 aaPredicted RBP1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 CRATP43155 626 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 C4orf26Q17RF5 130 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 HLA-DRB5Q30154 266 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 PPCDCQ96CD2 204 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 TTTY12Q9BZ98 90 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 C11orf1Q9H5F2 150 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 C16orf95Q9H693 158 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 PARVAQ9NVD7 372 aa1.93□□□□□ -2.1
PRPF40A-208ENST00000472760 NPATQ14207 1427 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 SLIT2O94813 1529 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 GRIFINA4D1Z8 144 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 GOLGA6L10A6NI86 522 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 STX10O60499 249 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 PSMG1O95456 288 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 CD36P16671 472 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 NPPCP23582 126 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 CRHBPP24387 322 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 TAS2R45P59539 299 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 TBC1D28Q2M2D7 210 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 SDHAF4Q5VUM1 108 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 FUNDC1Q8IVP5 155 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 RNASE11Q8TAA1 199 aaKnown RBP1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 FNDC9Q8TBE3 224 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 C7orf50Q9BRJ6 194 aaKnown RBP1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 GNB1LQ9BYB4 327 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 MROQ9BYG7 248 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 KMT2EQ8IZD2 1858 aa1.92□□□□□ -2.1
PRPF40A-208ENST00000472760 ADAMTSL1Q8N6G6 1762 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 MRASO14807 208 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 PSMB6P28072 239 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 CD151P48509 253 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 HERVK_113P63121 156 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 TMEM267Q0VDI3 215 aaPredicted RBP1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 SS18Q15532 418 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 LCN8Q6JVE9 175 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 CXCL16Q9H2A7 254 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 WDR54Q9H977 334 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 LCTP09848 1927 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 RIMS2Q9UQ26 1411 aa1.91□□□□□ -2.1
PRPF40A-208ENST00000472760 MUC21A0A0G2JKD1 596 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 MUC21A0A140T8X8 626 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 H3BPC8 53 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 GSTZ1O43708 216 aaPredicted RBP1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 S1PR2O95136 353 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 GZMBP10144 247 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 OR10J1P30954 320 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 CA7P43166 264 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 DAPP51397 102 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 CLDN12P56749 244 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 SKP1P63208 163 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 LRRC26Q2I0M4 334 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 TMEM31Q5JXX7 168 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 LGALS9CQ6DKI2 356 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 RIBC1Q8N443 379 aaPredicted RBP1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 OR2D3Q8NGH3 330 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 TMBIM1Q969X1 311 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 ZNF514Q96K75 400 aaPredicted RBP1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 ZNF426Q9BUY5 554 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 TP53TG1Q9Y2A0 90 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 HDGFL3Q9Y3E1 203 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 PCNX2A6NKB5 2137 aa1.9□□□□□ -2.11
PRPF40A-208ENST00000472760 ATAD5Q96QE3 1844 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 TRAV8-1A0A0A6YYK1 113 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 FABP12A6NFH5 140 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 H3BRN7 92 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 SLC17A3O00476 420 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 UBE2L6O14933 153 aa1.89□□□□□ -2.11
PRPF40A-208ENST00000472760 AZIN1O14977 448 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms