RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 DEDDO75618 318 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 MYL12AP19105 171 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 CDK2P24941 298 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 PPP1CCP36873 323 aaKnown RBP3.8□□□□□ -1.8
SMC5-202ENST00000471372 SNAP25P60880 206 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 NAA20P61599 178 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 BASP1P80723 227 aaKnown RBP3.8□□□□□ -1.8
SMC5-202ENST00000471372 DNLZQ5SXM8 178 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 TMEM136Q6ZRR5 245 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 LRP11Q86VZ4 500 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 RNF182Q8N6D2 247 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 OR5V1Q9UGF6 321 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 SLC23A2Q9UGH3 650 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 MRPS16Q9Y3D3 137 aaKnown RBP3.8□□□□□ -1.8
SMC5-202ENST00000471372 LINC00588Q9Y4M8 146 aa3.8□□□□□ -1.8
SMC5-202ENST00000471372 EEF1E1O43324 174 aaKnown RBP3.79□□□□□ -1.8
SMC5-202ENST00000471372 STK16O75716 305 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 RBBP9O75884 186 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 IFNA6P05013 189 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 PRPS1L1P21108 318 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 CRABP2P29373 138 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 DAPP51397 102 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 KLF3P57682 345 aaPredicted RBP3.79□□□□□ -1.8
SMC5-202ENST00000471372 ACSBG2Q5FVE4 666 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 LRRC34Q8IZ02 419 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 OR51D1Q8NGF3 324 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 ZNF721Q8TF20 911 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 HES4Q9HCC6 221 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 WASHC3Q9Y3C0 194 aa3.79□□□□□ -1.8
SMC5-202ENST00000471372 PCYT1BQ9Y5K3 369 aaPredicted RBP3.79□□□□□ -1.8
SMC5-202ENST00000471372 IGLV2-18A0A075B6J9 118 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 OR6C70A6NIJ9 312 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 IGLV3-27P01718 113 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 RAP1GDS1P52306 607 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 OR2F1Q13607 317 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 OTUB2Q96DC9 234 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 RMI2Q96E14 147 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 ZNF2Q9BSG1 426 aaPredicted RBP3.78□□□□□ -1.8
SMC5-202ENST00000471372 CYTL1Q9NRR1 136 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 SLC22A13Q9Y226 551 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 NUP205Q92621 2012 aa3.78□□□□□ -1.8
SMC5-202ENST00000471372 KIF15Q9NS87 1388 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 D6RAR5 112 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 M0R381 172 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 LECT2O14960 151 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 SH2D1AO60880 128 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 NEFHP12036 1026 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 RANP62826 216 aaKnown RBP3.77□□□□□ -1.81
SMC5-202ENST00000471372 REEP5Q00765 189 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 C10orf91Q5T1B1 145 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 NIT1Q86X76 327 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 C3orf22Q8N5N4 141 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 ANKRD36BP1Q96IX9 119 aa3.77□□□□□ -1.81
SMC5-202ENST00000471372 TRBV24-1A0A075B6N3 115 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 TMED7-TICAM2A0A0A6YYA0 188 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 OPN1SWP03999 348 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 DDTP30046 118 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 OR10J1P30954 320 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 ERVS71-1P61550 626 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 EMX1Q04741 257 aaPredicted RBP3.76□□□□□ -1.81
SMC5-202ENST00000471372 OR8G1Q15617 311 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 LY6EQ16553 131 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 C1orf194Q5T5A4 169 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 ZNF660Q6AZW8 331 aaPredicted RBP3.76□□□□□ -1.81
SMC5-202ENST00000471372 C1orf174Q8IYL3 243 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 UBL4BQ8N7F7 174 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 HIST1H2BAQ96A08 127 aa3.76□□□□□ -1.81
SMC5-202ENST00000471372 CARHSP1Q9Y2V2 147 aaKnown RBP3.76□□□□□ -1.81
SMC5-202ENST00000471372 LSM5Q9Y4Y9 91 aaKnown RBP3.76□□□□□ -1.81
SMC5-202ENST00000471372 THADAQ6YHU6 1953 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 IGKV1D-37A0A075B6S9 117 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 MAP2K4P45985 399 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 SLCO1A2P46721 670 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 OMPP47874 163 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 CCL7P80098 99 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 PRDX4Q13162 271 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 Q6ZQT7 251 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 IMP4Q96G21 291 aaKnown RBP3.75□□□□□ -1.81
SMC5-202ENST00000471372 PRAP1Q96NZ9 151 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 RSPO3Q9BXY4 272 aaPredicted RBP3.75□□□□□ -1.81
SMC5-202ENST00000471372 PECRQ9BY49 303 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 SLC2A9Q9NRM0 540 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 EMC3Q9P0I2 261 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 ZNF443Q9Y2A4 671 aaPredicted RBP3.75□□□□□ -1.81
SMC5-202ENST00000471372 CRB1P82279 1406 aa3.75□□□□□ -1.81
SMC5-202ENST00000471372 LINC00862A6NCI5 91 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 IGHMP01871 453 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 CA7P43166 264 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 SULT1A1P50225 295 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 CDK9P50750 372 aaKnown RBP3.74□□□□□ -1.81
SMC5-202ENST00000471372 TMEM33P57088 247 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 RAB5BP61020 215 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 FGF12P61328 243 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 HIST3H3Q16695 136 aa3.74□□□□□ -1.81
SMC5-202ENST00000471372 HIST2H3PS2Q5TEC6 136 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms