RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MUCL1Q96DR8 90 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 YIPF6Q96EC8 236 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF75AQ96N20 296 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 OPALINQ96PE5 141 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 AMELYQ99218 206 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 BCL7BQ9BQE9 202 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 NRN1Q9NPD7 142 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 NDUFB11Q9NX14 153 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 ONECUT1Q9UBC0 465 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 PPIAL4AQ9Y536 164 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 R4GMQ9 66 aa3.68□□□□□ -1.82
CCDC39-202ENST00000471307 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TRDV1A0A1B0GX56 115 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZFP92A6NM28 416 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 OR4C45A6NMZ5 311 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 F5H5K5 113 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 M0R135 149 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 GATBO75879 557 aaKnown RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ACSM4P0C7M7 580 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF14P17017 642 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CRYGSP22914 178 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TUBG1P23258 451 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 STOMP27105 288 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 FGF9P31371 208 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 APLNRP35414 380 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 UGT2B10P36537 528 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TGFBR2P37173 567 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CRYBB2P43320 205 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CX3CR1P49238 355 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 GDI2P50395 445 aaKnown RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 PRKXP51817 358 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 GTF2A1P52655 376 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 RIPPLY3P57055 190 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CDK5R1Q15078 307 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 UBE2V2Q15819 145 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 IGFBP7Q16270 282 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 SSX1Q16384 188 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 YIF1BQ5BJH7 314 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 C6orf226Q5I0X4 101 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 BCL2L15Q5TBC7 163 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM244Q5VVB8 128 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 GPR107Q5VW38 600 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CD200R1LQ6Q8B3 271 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CLEC2AQ6UVW9 174 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 NCCRP1Q6ZVX7 275 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 SSX9Q7RTT3 188 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 MDP1Q86V88 176 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CLVS1Q8IUQ0 354 aaPredicted RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 C1orf174Q8IYL3 243 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF283Q8N7M2 679 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF676Q8N7Q3 588 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 WDR31Q8NA23 367 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CCDC54Q8NEL0 328 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 OR5L1Q8NGL2 311 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 NANPQ8TBE9 248 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CA5BP1Q8WTZ4 195 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 RAB2BQ8WUD1 216 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 IL1F10Q8WWZ1 152 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 RNASE6Q93091 150 aaKnown RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 SMIM19Q96E16 107 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF799Q96GE5 643 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 DOK1Q99704 481 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TTTY10Q9BZA0 68 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 PBOV1Q9GZY1 135 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 AUNIPQ9H7T9 357 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 KCNJ16Q9NPI9 418 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 TUBG2Q9NRH3 451 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 FAM206AQ9NX38 181 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 NUFIP1Q9UHK0 495 aaKnown RBP3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF391Q9UJN7 358 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 OR52A1Q9UKL2 312 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 SSR3Q9UNL2 185 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 SLC25A15Q9Y619 301 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 PRR14LQ5THK1 2151 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 MYO18BQ8IUG5 2567 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF462Q96JM2 2506 aa3.67□□□□□ -1.82
CCDC39-202ENST00000471307 CADP27708 2225 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SPENQ96T58 3664 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 C5orf49A4QMS7 147 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 CCDC160A6NGH7 325 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TUBAL3A6NHL2 446 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SLC22A1O15245 554 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 XRCC2O43543 280 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 AIREO43918 545 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SC5DO75845 299 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 GABARAPO95166 117 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TTRP02766 147 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 PRB1P04280 392 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 CD2P06729 351 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 UBCP0CG48 685 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF35P13682 527 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 CFL1P23528 166 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 GADD45AP24522 165 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 KIR3DL2P43630 455 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF121P58317 390 aaPredicted RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 RPS25P62851 125 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 EWSR1Q01844 656 aaKnown RBP eCLIP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TSC22D1Q15714 1073 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TBC1D28Q2M2D7 210 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms