RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NDUFB11Q9NX14 153 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 MRPS16Q9Y3D3 137 aaKnown RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CUL7Q14999 1698 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ROBO1Q9Y6N7 1651 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 AKAP11Q9UKA4 1901 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TMEM94Q12767 1356 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 KIF15Q9NS87 1388 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 LAMC1P11047 1609 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ZCCHC11Q5TAX3 1644 aaKnown RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ADCY10Q96PN6 1610 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 DENND4BO75064 1496 aaPredicted RBP0.16□□□□□ -2.38
UBXN4-207ENST00000471246 ADGRL2O95490 1459 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 CFTRP13569 1480 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 PLEKHH2Q8IVE3 1493 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 MBD5Q9P267 1494 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 TJP1Q07157 1748 aa0.16□□□□□ -2.38
UBXN4-207ENST00000471246 NRCAMQ92823 1304 aa0.15□□□□□ -2.38
UBXN4-207ENST00000471246 CEP170Q5SW79 1584 aa0.15□□□□□ -2.38
UBXN4-207ENST00000471246 DNMBPQ6XZF7 1577 aa0.15□□□□□ -2.38
UBXN4-207ENST00000471246 ZNF831Q5JPB2 1677 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 THSD7AQ9UPZ6 1657 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 FMN1Q68DA7 1419 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CD109Q6YHK3 1445 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 MAP3K1Q13233 1512 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 FLGP20930 4061 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 IGHV3OR15-7A0A075B7D8 119 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TRAV8-3A0A0A6YYJ7 113 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 A0A1B0GXF2 115 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 A0A1W2PRF3 423 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 A0A1W2PRM7 423 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ARRDC5A6NEK1 342 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ARGFXA6NJG6 315 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CCDC169A6NNP5 214 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 A8MWP6 167 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 M0QXV9 152 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TCF21O43680 179 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ALOX12BO75342 701 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 MYO1DO94832 1006 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CRYGDP07320 174 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF705DP0CH99 300 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF705BP0CI00 300 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ALOX5APP20292 161 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 PEBP1P30086 187 aaKnown RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 SPAM1P38567 509 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CSKP41240 450 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 GPR4P46093 362 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 PLTPP55058 493 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TAS2R60P59551 318 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CTAG1AP78358 180 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 BEX3Q00994 111 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 C2orf80Q0P641 193 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 IL18Q14116 193 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ANGPT1Q15389 498 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ATP6V1FQ16864 119 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 GOLGA7BQ2TAP0 167 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CEACAM21Q3KPI0 293 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CST9Q5W186 159 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 SDIM1Q6ZPB5 146 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 SLC35D2Q76EJ3 337 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 MRPL21Q7Z2W9 205 aaKnown RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 COMMD1Q8N668 190 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ZFAND2AQ8N6M9 145 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 OR4X2Q8NGF9 303 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ZNRF2Q8NHG8 242 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 ERMNQ8TAM6 284 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CD200R1Q8TD46 325 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 GPX8Q8TED1 209 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 GLYATL2Q8WU03 294 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TFGQ92734 400 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TMIGD2Q96BF3 282 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CERS2Q96G23 380 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 TIMM21Q9BVV7 248 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CHRNA10Q9GZZ6 450 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 SLC25A31Q9H0C2 315 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 OR2AG1Q9H205 316 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 C8orf33Q9H7E9 229 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 LRTM1Q9HBL6 345 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 DNAJC27Q9NZQ0 273 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 PRO2289Q9P1D8 64 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 SOX21Q9Y651 276 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 HECW1Q76N89 1606 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 PTPRBP23467 1997 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 NUP188Q5SRE5 1749 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 FANCAO15360 1455 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 CAMSAP2Q08AD1 1489 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 MAGI1Q96QZ7 1491 aaPredicted RBP0.15□□□□□ -2.39
UBXN4-207ENST00000471246 DNAH2Q9P225 4427 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 LPAP08519 4548 aa0.15□□□□□ -2.39
UBXN4-207ENST00000471246 WDR19Q8NEZ3 1342 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 USP42Q9H9J4 1324 aaKnown RBP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 ADAMTSL1Q8N6G6 1762 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 NPATQ14207 1427 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 VPS13DQ5THJ4 4388 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 DNAH8Q96JB1 4490 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 ABCC3O15438 1527 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 NEXMIFQ5QGS0 1516 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.14□□□□□ -2.39
UBXN4-207ENST00000471246 LRRC37A2A6NM11 1700 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 TRAV8-7A0A075B6U6 113 aa0.14□□□□□ -2.39
UBXN4-207ENST00000471246 PGPA6NDG6 321 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms