RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 OR8H3Q8N146 312 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 PARP12Q9H0J9 701 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 HILPDAQ9Y5L2 63 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 GABARAPH6UMI1 98 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 LANCL1O43813 399 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 RCVRNP35243 200 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 TAS2R46P59540 309 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 ACTBP60709 375 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 ACTG1P63261 375 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 LIAT1Q6ZQX7 453 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR5AP2Q8NGF4 316 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 RTN4IP1Q8WWV3 396 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 SSX3Q99909 188 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 SOSTQ9BQB4 213 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 C11orf54Q9H0W9 315 aaPredicted RBP12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 PIPOXQ9P0Z9 390 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 VPREB3Q9UKI3 123 aa12.03□□□□□ -0.48
CDC42SE1-203ENST00000470278 SAA2-SAA4A0A096LPE2 208 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 MEIS3P1A6NDR6 274 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 H3BUX3 64 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 TRIM77I1YAP6 450 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 RAB29O14966 203 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 TUSC2O75896 110 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 GAPDHP04406 335 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 SAA2P0DJI9 122 aaPredicted RBP12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 PAX6P26367 422 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 BRS3P32247 399 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 SSBP1Q04837 148 aaKnown RBP12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 IL18Q14116 193 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 CCDC190Q86UF4 302 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 PIFOQ8TCI5 191 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 SMIM4Q8WVI0 70 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 CFHR4Q92496 578 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 CHIAQ9BZP6 476 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 NECAP2Q9NVZ3 263 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 V9GYH0 126 aa12.02□□□□□ -0.49
CDC42SE1-203ENST00000470278 IGHV1-3A0A0C4DH29 117 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 WIPF1O43516 503 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 PTBP1P26599 531 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■□□□ 13.6
CDC42SE1-203ENST00000470278 ETV6P41212 452 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 CDK10Q15131 360 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 TGIF2LXQ8IUE1 241 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR6Q1Q8NGQ2 317 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR52I2Q8NH67 350 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 FCAMRQ8WWV6 532 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 ABCB10Q9NRK6 738 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 MTFP1Q9UDX5 166 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 ZNF107Q9UII5 783 aaPredicted RBP12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 PITPNC1Q9UKF7 332 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 TCF19Q9Y242 345 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 RBMX2Q9Y388 322 aaKnown RBP12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR2W1Q9Y3N9 320 aa12.01□□□□□ -0.49
CDC42SE1-203ENST00000470278 FABP12A6NFH5 140 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 FAM90A9PA6NNJ1 464 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 HAX1O00165 279 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 TIMM23O14925 209 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR5H8P0DN80 308 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 TBPP20226 339 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 PLA1AQ53H76 456 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 ACTBL2Q562R1 376 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 LYSMD2Q8IV50 215 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 DUX5Q96PT3 197 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 GAB2Q9UQC2 676 aa12□□□□□ -0.49
CDC42SE1-203ENST00000470278 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 RBBP9O75884 186 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR3A3P47888 321 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 REG1BP48304 166 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 DGCR2P98153 550 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 DYRK1AQ13627 763 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 CNPY1Q3B7I2 92 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 SPANXN2Q5MJ10 180 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 VAX1Q5SQQ9 334 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 C16orf87Q6PH81 154 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 FAM131AQ6UXB0 335 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 LINC00299Q6ZSB3 139 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 THNSL2Q86YJ6 484 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR5H2Q8NGV7 314 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR56B4Q8NH76 319 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 ABHD14BQ96IU4 210 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 S1PR3Q99500 378 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 OR2D2Q9H210 308 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 RAB18Q9NP72 206 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 KLK11Q9UBX7 282 aa11.99□□□□□ -0.49
CDC42SE1-203ENST00000470278 A6NDX4 124 aa11.98□□□□□ -0.49
CDC42SE1-203ENST00000470278 GPR137BO60478 399 aa11.98□□□□□ -0.49
CDC42SE1-203ENST00000470278 SLC22A5O76082 557 aa11.98□□□□□ -0.49
CDC42SE1-203ENST00000470278 FCER2P06734 321 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms