RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 DFFBO76075 338 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 ACAA1P09110 424 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-205ENST00000469687 HOXB1P14653 301 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-205ENST00000469687 G6PCP35575 357 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 COL10A1Q03692 680 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 ICAM4Q14773 271 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 ZNF525Q8N782 197 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 RFESDQ8TAC1 157 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
CBWD3-205ENST00000469687 ZNF71Q9NQZ8 489 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-205ENST00000469687 ATMQ13315 3056 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 OOEPA6NGQ2 149 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 DEFB108AA8MXU0 73 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 KRASP01116 189 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 IFNA5P01569 189 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 KITLGP21583 273 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 PAX6P26367 422 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 EIF4EBP1Q13541 118 aaPredicted RBP12.29□□□□□ -0.44
CBWD3-205ENST00000469687 KRBOX4Q5JUW0 171 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 SLC35E4Q6ICL7 350 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 A0A1W2PR64 198 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 C17orf98A8MV24 154 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 SCAF4O95104 1147 aaKnown RBP12.29□□□□□ -0.44
CBWD3-205ENST00000469687 CGAP01215 116 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 SRP19P09132 144 aaKnown RBP12.29□□□□□ -0.44
CBWD3-205ENST00000469687 CD200P41217 278 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 HNF4GQ14541 408 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 RPRMLQ8N4K4 120 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 RPRMQ9NS64 109 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 ZNF292O60281 2723 aa12.29□□□□□ -0.44
CBWD3-205ENST00000469687 HCFC1P51610 2035 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 OR5H1A6NKK0 313 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 S1PR2O95136 353 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 FOLR2P14207 255 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 EGR1P18146 543 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 UBE2KP61086 200 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 ZNF718Q3SXZ3 478 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 SPRNQ5BIV9 151 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-205ENST00000469687 FAM24BQ8N5W8 94 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 CD177Q8N6Q3 437 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 PROCRQ9UNN8 238 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 RP1L1Q8IWN7 2480 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-205ENST00000469687 PIGBOS1A0A0B4J2F0 54 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 GCH1P30793 250 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 TLE4Q04727 773 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 RHEBQ15382 184 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 LTC4SQ16873 150 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 KDF1Q8NAX2 398 aaPredicted RBP12.28□□□□□ -0.44
CBWD3-205ENST00000469687 PLPPR2Q96GM1 343 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 RBKSQ9H477 322 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 BIN3Q9NQY0 253 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 MMP24Q9Y5R2 645 aa12.28□□□□□ -0.44
CBWD3-205ENST00000469687 PTAFRP25105 342 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 FGF8P55075 233 aaPredicted RBP12.27□□□□□ -0.45
CBWD3-205ENST00000469687 EDDM3AQ14507 147 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 LILRB2Q8N423 598 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 OR2Z1Q8NG97 314 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 SCGB1C1Q8TD33 95 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 OR4C12Q96R67 309 aa12.27□□□□□ -0.45
CBWD3-205ENST00000469687 RIF1Q5UIP0 2472 aaKnown RBP12.27□□□□□ -0.45
CBWD3-205ENST00000469687 A0A1W2PPE3 182 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 ODAMA1E959 279 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 LINC00473A8K010 186 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 RNF212BA8MTL3 300 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 AHRRA9YTQ3 701 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 H3BQ15 152 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 ST8SIA5O15466 376 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 CLDN1O95832 211 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 CD55P08174 381 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 P0C879 139 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
CBWD3-205ENST00000469687 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
CBWD3-205ENST00000469687 TNFRSF9Q07011 255 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 SMIM21Q3B7S5 101 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
CBWD3-205ENST00000469687 OR8G2PQ6IF36 304 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 LCN15Q6UWW0 184 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 NINJ1Q92982 152 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 SMDT1Q9H4I9 107 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 CLN8Q9UBY8 286 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 DUSP13Q9UII6 198 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 SLC25A15Q9Y619 301 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
CBWD3-205ENST00000469687 ZNF727A8MUV8 499 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms