RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 SAMHD1Q9Y3Z3 626 aaKnown RBP3.91□□□□□ -1.78
PTPN4-209ENST00000469511 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.78
PTPN4-209ENST00000469511 A0A1W2PP11 408 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 A0A1W2PQL4 384 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-209ENST00000469511 M0R2N4 97 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 RRHO14718 337 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 NXPH3O95157 252 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 SERPINA3P01011 423 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 MT-ND4P03905 459 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM225BP0DP42 221 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 HSD17B1P14061 328 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 CTRB1P17538 263 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 ZP3P21754 424 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 EPHA2P29317 976 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF45Q02386 682 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 TP53I3Q53FA7 332 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 LPCAT4Q643R3 524 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF660Q6AZW8 331 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-209ENST00000469511 CTRB2Q6GPI1 263 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 C8orf31Q8N9H6 132 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 OR52L2PQ8NGH6 319 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 OR52M1Q8NGK5 317 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 GIPC3Q8TF64 312 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 CNN2Q99439 309 aaKnown RBP3.9□□□□□ -1.79
PTPN4-209ENST00000469511 SIKE1Q9BRV8 207 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 DPCDQ9BVM2 203 aaPredicted RBP3.9□□□□□ -1.79
PTPN4-209ENST00000469511 MOB1AQ9H8S9 216 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 SPAG4Q9NPE6 437 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF355PQ9NSJ1 428 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 FAM118AQ9NWS6 357 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 FBXL17Q9UF56 701 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.79
PTPN4-209ENST00000469511 METTL15A6NJ78 407 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF670-ZNF695F2Z2N8 137 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 BMPR1BO00238 502 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 DEFB4AO15263 64 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 SPRY2O43597 315 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 LANCL1O43813 399 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 GMNNO75496 209 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 CDRT1O95170 752 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 CA2P00918 260 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 HLA-AP01891 365 aaKnown RBP3.89□□□□□ -1.79
PTPN4-209ENST00000469511 HBZP02008 142 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 HMGN1P05114 100 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 IL6RP08887 468 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-209ENST00000469511 APELAP0DMC3 54 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 RCC1P18754 421 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-209ENST00000469511 GZMHP20718 246 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 PRKACBP22694 351 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 IL3RAP26951 378 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 FCGR2BP31994 310 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-209ENST00000469511 EFNB1P98172 346 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 MS4A2Q01362 244 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 PAX5Q02548 391 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF85Q03923 595 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 PJVKQ0ZLH3 352 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 MORN2Q502X0 79 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 AKIRIN2Q53H80 203 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 AADACL4Q5VUY2 407 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 FAM131AQ6UXB0 335 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 Q6ZNX1 250 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 LINC00336Q6ZUF6 198 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 UTS2BQ765I0 119 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 MAPKAPK5-AS1Q8N8E1 139 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 OR51A2Q8NGJ7 313 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 OR4K15Q8NH41 348 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 PP6455Q8WZ26 134 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 RFKQ969G6 155 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 GGTLC1Q9BX51 225 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 REEP1Q9H902 201 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 CLN6Q9NWW5 311 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 NDE1Q9NXR1 346 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 SLC2A8Q9NY64 477 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 GNG12Q9UBI6 72 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 PEF1Q9UBV8 284 aaKnown RBP3.89□□□□□ -1.79
PTPN4-209ENST00000469511 STEAP1Q9UHE8 339 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 DMRT1Q9Y5R6 373 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM14AQ9Y6G1 99 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 NACAE9PAV3 2078 aa3.89□□□□□ -1.79
PTPN4-209ENST00000469511 SAA2-SAA4A0A096LPE2 208 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 LOC102724200A0A096LPH7 203 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 C13orf42A0A1B0GVH6 325 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 PPP5D1E7EU14 171 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 GABRPO00591 440 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 GEMIN2O14893 280 aaKnown RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 ORC5O43913 435 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 PROP1O75360 226 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 S1PR2O95136 353 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 TNFRSF6BO95407 300 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 PRH1P02810 166 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 MT-ND2P03891 347 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 KRT8P05787 483 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 SAA2P0DJI9 122 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-209ENST00000469511 CT45A6P0DMU7 189 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 CT45A5P0DMU8 189 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 CT45A7P0DMV0 189 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 FOLR2P14207 255 aa3.88□□□□□ -1.79
PTPN4-209ENST00000469511 PPP1CCP36873 323 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms