RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 BLNKQ8WV28 456 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 PPP1R36Q96LQ0 422 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 PEBP4Q96S96 227 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 NDEL1Q9GZM8 345 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 SDHAF3Q9NRP4 125 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 DNAJC27Q9NZQ0 273 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 ZNF706Q9Y5V0 76 aaPredicted RBP2.62□□□□□ -1.99
LSM5-209ENST00000468872 URGCP-MRPS24S4R325 110 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 WNK1Q9H4A3 2382 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 ANK2Q01484 3957 aa2.62□□□□□ -1.99
LSM5-209ENST00000468872 RTL1A6NKG5 1358 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 SCN9AQ15858 1988 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 ZNF233A6NK53 670 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 M0QXV9 152 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 SGCEO43556 437 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 KCNK2O95069 426 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 CDK1P06493 297 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 PFN1P07737 140 aaKnown RBP2.61□□□□□ -1.99
LSM5-209ENST00000468872 GIMD1P0DJR0 217 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 M6PRP20645 277 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 HLA-DMAP28067 261 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 RAB38P57729 211 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 RPS11P62280 158 aaKnown RBP eCLIP2.61□□□□□ -1.99
LSM5-209ENST00000468872 VSNL1P62760 191 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 ATP6AP1LQ52LC2 224 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 ACTBL2Q562R1 376 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 Q6ZT83 130 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 SPICQ8N5J4 248 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 ZNF680Q8NEM1 530 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 OR8G5Q8NG78 346 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 CCL17Q92583 94 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 FXYD5Q96DB9 178 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 FMC1Q96HJ9 113 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 THTPAQ9BU02 230 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 POTEKPQ9BYX7 375 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 SRRQ9GZT4 340 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 HDHD2Q9H0R4 259 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 VSIRQ9H7M9 311 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 TMBIM4Q9HC24 238 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 TAC3Q9UHF0 121 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 FADS3Q9Y5Q0 445 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 LOXHD1Q8IVV2 1947 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 TRIP11Q15643 1979 aa2.61□□□□□ -1.99
LSM5-209ENST00000468872 MYO7AQ13402 2215 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 A0A1B0GXF2 115 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 OR6C70A6NIJ9 312 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 UPK2O00526 184 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 FFAR1O14842 300 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 GYG2O15488 501 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 SLC37A4O43826 429 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 SHOX2O60902 331 aaPredicted RBP2.6□□□□□ -1.99
LSM5-209ENST00000468872 KLHL2O95198 593 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 RD3LP0DJH9 198 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 EMP2P54851 167 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 CCL23P55773 120 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 UBE2KP61086 200 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 FLI1Q01543 452 aaPredicted RBP2.6□□□□□ -1.99
LSM5-209ENST00000468872 TPBGQ13641 420 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 MRPL2Q5T653 305 aaKnown RBP2.6□□□□□ -1.99
LSM5-209ENST00000468872 TPGS1Q6ZTW0 290 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 SSX6Q7RTT6 188 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 LINC00596Q86U02 117 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 BOD1L2Q8IYS8 172 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 OR2K2Q8NGT1 345 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 OR2AE1Q8NHA4 323 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 SHANK2-AS3Q9BTD1 123 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 MED10Q9BTT4 135 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 POMKQ9H5K3 350 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 IMP3Q9NV31 184 aaKnown RBP2.6□□□□□ -1.99
LSM5-209ENST00000468872 PLXNB2O15031 1838 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 ZANQ9Y493 2812 aa2.6□□□□□ -1.99
LSM5-209ENST00000468872 COL11A1P12107 1806 aaPredicted RBP2.59□□□□□ -1.99
LSM5-209ENST00000468872 C1orf232A0A0U1RR37 186 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 SPAARA0A1B0GVQ0 90 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 TMEM213A2RRL7 107 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 FABP12A6NFH5 140 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 LDOC1O95751 146 aaPredicted RBP2.59□□□□□ -1.99
LSM5-209ENST00000468872 IGKV5-2P06315 115 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 SYT1P21579 422 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 IMPA1P29218 277 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 CD40LGP29965 261 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 TMEM241Q24JQ0 296 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 TMEM144Q7Z5S9 345 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 GALNT10Q86SR1 603 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 ZNF565Q8N9K5 539 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 LINC00304Q8N9R0 145 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 DEFB124Q8NES8 71 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 OR4C13Q8NGP0 309 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 OR5P2Q8WZ92 322 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 RBPMSQ93062 196 aaKnown RBP2.59□□□□□ -1.99
LSM5-209ENST00000468872 BIRC8Q96P09 236 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 INIPQ9NRY2 104 aa2.59□□□□□ -1.99
LSM5-209ENST00000468872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.59□□□□□ -2
LSM5-209ENST00000468872 A0A1W2PP64 1363 aa2.59□□□□□ -2
LSM5-209ENST00000468872 GOLGA6L4A6NEF3 574 aa2.58□□□□□ -2
LSM5-209ENST00000468872 KLRC4-KLRK1H3BQV0 150 aa2.58□□□□□ -2
LSM5-209ENST00000468872 K7EPK0 472 aa2.58□□□□□ -2
LSM5-209ENST00000468872 PLPP3O14495 311 aa2.58□□□□□ -2
LSM5-209ENST00000468872 ISLRO14498 428 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms