RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CISD1Q9NZ45 108 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-211ENST00000468468 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 A0A1W2PR80 420 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 BCL2P10415 239 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF585BQ52M93 769 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 MRPL37Q9BZE1 423 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 PARD6AQ9NPB6 346 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 B4DEV8 164 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 MDH2P40926 338 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 FAM180AQ6UWF9 173 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 EP300Q09472 2414 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-211ENST00000468468 KMT2EQ8IZD2 1858 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 SOX15O60248 233 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 WDR1O75083 606 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 OR2H2O95918 312 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 HBG1P69891 147 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 HBG2P69892 147 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 LRRC75BQ2VPJ9 315 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 SPANXN5Q5MJ07 72 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 ALKBH2Q6NS38 261 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 MOB1BQ7L9L4 216 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 VASH2Q86V25 355 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 MDP1Q86V88 176 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 OR1K1Q8NGR3 316 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 PSMG3Q9BT73 122 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 IL18BPO95998 194 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 PKIAP61925 76 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 ZNF497Q6ZNH5 498 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 DEFB124Q8NES8 71 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 RTL8AQ9BWD3 113 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 RNF150Q9ULK6 438 aa13.34□□□□□ -0.27
TSPAN4-211ENST00000468468 ESPL1Q14674 2120 aa13.33□□□□□ -0.27
TSPAN4-211ENST00000468468 TRGC2P03986 189 aa13.33□□□□□ -0.27
TSPAN4-211ENST00000468468 WDR86Q86TI4 376 aa13.33□□□□□ -0.27
TSPAN4-211ENST00000468468 RCC1LQ96I51 464 aaKnown RBP13.33□□□□□ -0.27
TSPAN4-211ENST00000468468 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.27
TSPAN4-211ENST00000468468 URB1O60287 2271 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 SPAARA0A1B0GVQ0 90 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 TSTD3H0UI37 97 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 EREGO14944 169 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BKO60814 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BJP06899 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 SOD3P08294 240 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BOP23527 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BBP33778 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 CEACAM6P40199 344 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BDP58876 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BCP62807 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 SCCPDHQ8NBX0 429 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.28
TSPAN4-211ENST00000468468 SP1P08047 785 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 MEOX1P50221 254 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 NUTF2P61970 127 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 SERF2P84101 59 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 FER1L6-AS2Q96M78 137 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 OR4C12Q96R67 309 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 ANKRD39Q53RE8 183 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 DRAM1Q8N682 238 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 NANOS1Q8WY41 292 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 WDR61Q9GZS3 305 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 GP6Q9HCN6 339 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 TP53TG5Q9Y2B4 290 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 OTOGLQ3ZCN5 2332 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 CEBPZOSA8MTT3 80 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 TMEM41BQ5BJD5 291 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 ARL6IP6Q8N6S5 226 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
TSPAN4-211ENST00000468468 CLDN34H7C241 214 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 FBXW9Q5XUX1 488 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 PIP4P1Q86T03 277 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 FGFRL1Q8N441 504 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 MDS2Q8NDY4 140 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 VAX2Q9UIW0 290 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 MAP1LC3B2A6NCE7 125 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 CDIPTO14735 213 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 NXPH2O95156 264 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 MBP02144 154 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 FABP4P15090 132 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 ERVK11-1P61568 191 aa13.31□□□□□ -0.28
TSPAN4-211ENST00000468468 TBC1D28Q2M2D7 210 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms