RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CLDN16Q9Y5I7 305 aa11.8□□□□□ -0.52
BRAT1-203ENST00000467558 NAT2P11245 290 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 TMEM11P17152 192 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 OR5B3Q8NH48 314 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 RHOVQ96L33 236 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 SOSTQ9BQB4 213 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 SCNM1Q9BWG6 230 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 IGKV3D-15A0A087WSY6 115 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 J3QR06 171 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 IGHV1-2P23083 117 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 ATP6V0CP27449 155 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 NHLH2Q02577 135 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 ARL16Q0P5N6 197 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 ZIC4Q8N9L1 334 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 PLXNA4Q9HCM2 1894 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 TICRRQ7Z2Z1 1910 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 DOLPP1Q86YN1 238 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 FAM57AQ8TBR7 257 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 ZNF596Q8TC21 504 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 C2CD4CQ8TF44 421 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 RNF2Q99496 336 aa11.79□□□□□ -0.52
BRAT1-203ENST00000467558 CLDN34H7C241 214 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 DVL1O14640 695 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 RAB4AP20338 218 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 FGF8P55075 233 aaPredicted RBP11.78□□□□□ -0.52
BRAT1-203ENST00000467558 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 A0A087WV48 116 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 FOXD3Q9UJU5 478 aaPredicted RBP11.78□□□□□ -0.52
BRAT1-203ENST00000467558 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 PITX3O75364 302 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 SCGB1D1O95968 90 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 GGNQ86UU5 652 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 SS18L1O75177 396 aaPredicted RBP11.78□□□□□ -0.52
BRAT1-203ENST00000467558 ERVFC1-1P60608 527 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 PSG7Q13046 419 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 CCDC144NLQ6NUI1 221 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 FGFRL1Q8N441 504 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 OR4F17Q8NGA8 305 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 AAMDCQ9H7C9 122 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 JPT1Q9UK76 154 aa11.78□□□□□ -0.52
BRAT1-203ENST00000467558 ERVFRD-1P60508 538 aa11.77□□□□□ -0.52
BRAT1-203ENST00000467558 SLC35E4Q6ICL7 350 aa11.77□□□□□ -0.52
BRAT1-203ENST00000467558 CTDSP1Q9GZU7 261 aa11.77□□□□□ -0.52
BRAT1-203ENST00000467558 C20orf202A1L168 122 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 MC5RP33032 325 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 GLIPR1P48060 266 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 SERF2P84101 59 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 CLEC12BQ2HXU8 276 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 OR10A7Q8NGE5 316 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 WBP1Q96G27 269 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 MANBALQ9NQG1 85 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 ZNF319Q9P2F9 582 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 IGKV1-9A0A0C4DH69 117 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 ZNF320A2RRD8 509 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
BRAT1-203ENST00000467558 ZNF660Q6AZW8 331 aaPredicted RBP11.77□□□□□ -0.53
BRAT1-203ENST00000467558 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
BRAT1-203ENST00000467558 AQP10Q96PS8 301 aa11.77□□□□□ -0.53
BRAT1-203ENST00000467558 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
BRAT1-203ENST00000467558 KCNAB3O43448 404 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 REG1BP48304 166 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
BRAT1-203ENST00000467558 TMEM30BQ3MIR4 351 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 G3V3Q6 166 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 CLN5O75503 358 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
BRAT1-203ENST00000467558 NMBP08949 121 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 ZNF250P15622 560 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 SPCS3P61009 180 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 IGHV2OR16-5A0A0B4J2B6 119 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 FAM90A26D6RGX4 464 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 ORM2P19652 201 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 ERVS71-1P61550 626 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 SSMEM1Q8WWF3 244 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 M0QZ24 198 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 CHEK1O14757 476 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 RHBDL1O75783 438 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 FAM87AP0C7U9 286 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 GFRA1P56159 465 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 Q0VFX4 171 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 MEGF10Q96KG7 1140 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 DOK5Q9P104 306 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
BRAT1-203ENST00000467558 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms