RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NUP62P37198 522 aaPredicted RBP0.87□□□□□ -2.27
SMC4-207ENST00000467263 FGF12P61328 243 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 FLOT2Q14254 428 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 TMEM239Q8WW34 195 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 ABHD14BQ96IU4 210 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 MIEN1Q9BRT3 115 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 LINC00527Q9UJ94 153 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 FREM1Q5H8C1 2179 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 ZNF532Q9HCE3 1301 aa0.87□□□□□ -2.27
SMC4-207ENST00000467263 TRAV41A0A0B4J266 112 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 OR5K4A6NMS3 321 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 ZNF705FA8MVS1 300 aaPredicted RBP0.86□□□□□ -2.27
SMC4-207ENST00000467263 STK16O75716 305 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 ZNF728P0DKX0 622 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 NPPCP23582 126 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 ATP6V0CP27449 155 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 OR1E2P47887 323 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 GTF2BQ00403 316 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 PRB3Q04118 309 aaPredicted RBP0.86□□□□□ -2.27
SMC4-207ENST00000467263 RAB31Q13636 194 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 PSG3Q16557 428 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 HSP90B2PQ58FF3 399 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 TTC33Q6PID6 262 aaPredicted RBP0.86□□□□□ -2.27
SMC4-207ENST00000467263 ST13P4Q8IZP2 240 aaPredicted RBP0.86□□□□□ -2.27
SMC4-207ENST00000467263 ENPP5Q9UJA9 477 aa0.86□□□□□ -2.27
SMC4-207ENST00000467263 CHD2O14647 1828 aaKnown RBP0.86□□□□□ -2.27
SMC4-207ENST00000467263 FBN2P35556 2912 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 OR11H12B2RN74 326 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 M0QYV0 167 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 CST4P01036 141 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 OPRM1P35372 400 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 G6PCP35575 357 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 LINC00313P59037 77 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 RELAQ04206 551 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 XRCC4Q13426 336 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 TMEM31Q5JXX7 168 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 XKRXQ6PP77 449 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 CCDC112Q8NEF3 446 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 OR11H2Q8NH07 326 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 TAMM41Q96BW9 452 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 MED28Q9H204 178 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 COMMD9Q9P000 198 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 MRM2Q9UI43 246 aaKnown RBP0.85□□□□□ -2.27
SMC4-207ENST00000467263 HHLA2Q9UM44 414 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 FAM215AQ9Y5M1 114 aa0.85□□□□□ -2.27
SMC4-207ENST00000467263 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 CUL9Q8IWT3 2517 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 DLG5Q8TDM6 1919 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 NDUFS8O00217 210 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 IGHV1-69P01742 117 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 PSMD7P51665 324 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 ZNF791Q3KP31 576 aaPredicted RBP0.84□□□□□ -2.27
SMC4-207ENST00000467263 PABPC1L2AQ5JQF8 200 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 LHFPL1Q86WI0 220 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 PLCZ1Q86YW0 608 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 OR8B12Q8NGG6 310 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 OR5J2Q8NH18 312 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 CCDC127Q96BQ5 260 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 ANGPT4Q9Y264 503 aa0.84□□□□□ -2.27
SMC4-207ENST00000467263 SOX21Q9Y651 276 aaPredicted RBP0.84□□□□□ -2.27
SMC4-207ENST00000467263 MYH11P35749 1972 aa0.84□□□□□ -2.28
SMC4-207ENST00000467263 PCDH15Q96QU1 1955 aa0.84□□□□□ -2.28
SMC4-207ENST00000467263 DISP1Q96F81 1524 aa0.84□□□□□ -2.28
SMC4-207ENST00000467263 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
SMC4-207ENST00000467263 PTPRBP23467 1997 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 SLC17A3O00476 420 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 SGCEO43556 437 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 PGLYRP1O75594 196 aaPredicted RBP0.83□□□□□ -2.28
SMC4-207ENST00000467263 ASS1P00966 412 aaKnown RBP0.83□□□□□ -2.28
SMC4-207ENST00000467263 BPGMP07738 259 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 CD7P09564 240 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 OR13C7P0DN81 318 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 CCL2P13500 99 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 XCL1P47992 114 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 DAPP51397 102 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 IDH3GP51553 393 aaPredicted RBP0.83□□□□□ -2.28
SMC4-207ENST00000467263 FAM3AP98173 230 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 DRAM2Q6UX65 266 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 SLC35E3Q7Z769 313 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 CNEP1R1Q8N9A8 125 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 CYGBQ8WWM9 190 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 ACBD6Q9BR61 282 aa0.83□□□□□ -2.28
SMC4-207ENST00000467263 MYOFQ9NZM1 2061 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 A0A1W2PQD3 144 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 C1QCP02747 245 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 LIMS3P0CW19 117 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 LIMS4P0CW20 117 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 NQO2P16083 231 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 ADORA1P30542 326 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 TAS2R45P59539 299 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 C1DQ13901 141 aaKnown RBP0.82□□□□□ -2.28
SMC4-207ENST00000467263 AMTNQ6UX39 209 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 RNF133Q8WVZ7 376 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 SLC35G5Q96KT7 338 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 TMEM56Q96MV1 263 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 FAM210AQ96ND0 272 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 CYSTM1Q9H1C7 97 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 HHLA3Q9XRX5 114 aa0.82□□□□□ -2.28
SMC4-207ENST00000467263 ROS1P08922 2347 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms