RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 C20orf204Q6ZNR8 217 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 DEFB119Q8N690 84 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
CHD1L-205ENST00000467213 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
CHD1L-205ENST00000467213 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
CHD1L-205ENST00000467213 YPEL2Q96QA6 119 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 KCNIP2Q9NS61 270 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 KNL1Q8NG31 2342 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 ELLP55199 621 aaPredicted RBP13.17□□□□□ -0.3
CHD1L-205ENST00000467213 SOX8P57073 446 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 MLF1P58340 268 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 TEX43Q6ZNM6 134 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 NECAP1Q8NC96 275 aa13.17□□□□□ -0.3
CHD1L-205ENST00000467213 ZCCHC14Q8WYQ9 949 aaKnown RBP13.17□□□□□ -0.3
CHD1L-205ENST00000467213 C2CD4DB7Z1M9 353 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 HS3ST1O14792 307 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 TNFSF13O75888 250 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 GPM6AP51674 278 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 DLL3Q9NYJ7 618 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 DLEU1O43261 78 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 SYNGR4O95473 234 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 COX6A1P12074 109 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
CHD1L-205ENST00000467213 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
CHD1L-205ENST00000467213 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
CHD1L-205ENST00000467213 PRSS12P56730 875 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 MRPL21Q7Z2W9 205 aaKnown RBP13.15□□□□□ -0.3
CHD1L-205ENST00000467213 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
CHD1L-205ENST00000467213 WIPI2Q9Y4P8 454 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 SLC33A1O00400 549 aaPredicted RBP13.15□□□□□ -0.3
CHD1L-205ENST00000467213 FAM58AQ8N1B3 248 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 MIEN1Q9BRT3 115 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 DUSP23Q9BVJ7 150 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 ABCA7Q8IZY2 2146 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 RTTNQ86VV8 2226 aa13.15□□□□□ -0.3
CHD1L-205ENST00000467213 SCGB1D1O95968 90 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 JMJD7P0C870 316 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 IL11RAQ14626 422 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.31
CHD1L-205ENST00000467213 Q6P435 159 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 MS4A10Q96PG2 267 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 ELOVL5Q9NYP7 299 aa13.15□□□□□ -0.31
CHD1L-205ENST00000467213 GNG3P63215 75 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 RTP5Q14D33 572 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 Q8IYB0 196 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 CBY1Q9Y3M2 126 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 LILRA1O75019 489 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 EIF4EBP1Q13541 118 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-205ENST00000467213 FFAR4Q5NUL3 377 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 WDR31Q8NA23 367 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
CHD1L-205ENST00000467213 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
CHD1L-205ENST00000467213 C11orf94C9JXX5 98 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 OR3A1P47881 315 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 TRIP6Q15654 476 aaKnown RBP13.13□□□□□ -0.31
CHD1L-205ENST00000467213 IZUMO4Q1ZYL8 232 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 PRDM6Q9NQX0 595 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 CBLN4Q9NTU7 201 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 IL36RNQ9UBH0 155 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 REV3LO60673 3130 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 LRRC30A6NM36 301 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 PAGE4O60829 102 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 MPDU1O75352 247 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 HPRT1P00492 218 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 SRFP11831 508 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 NPPCP23582 126 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 TPPP2P59282 170 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 NUFIP2Q7Z417 695 aaKnown RBP13.13□□□□□ -0.31
CHD1L-205ENST00000467213 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 TMEM204Q9BSN7 226 aa13.13□□□□□ -0.31
CHD1L-205ENST00000467213 MMP23AO75900 390 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 CLDN1O95832 211 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 UMODP07911 640 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 CASP6P55212 293 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 FAM78BQ5VT40 261 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 DRAM1Q8N682 238 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 OR10D3Q8NH80 312 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 OR1A1Q9P1Q5 309 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 GOLT1BQ9Y3E0 138 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 A0A0U1RQK1 487 aa13.12□□□□□ -0.31
CHD1L-205ENST00000467213 A0A1W2PQM1 296 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms