RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 RAB3DO95716 219 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 FBP1P09467 338 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 FAM157CP0CG43 387 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-205ENST00000466897 FCGR2CP31995 323 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 RFX2P48378 723 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-205ENST00000466897 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-205ENST00000466897 MSMO1Q15800 293 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 BAK1Q16611 211 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 AANATQ16613 207 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 TPTE2P1Q5T6R2 138 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 LHFPL4Q7Z7J7 247 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 TOMM5Q8N4H5 51 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 MEGF9Q9H1U4 602 aa12.3□□□□□ -0.44
NPHP4-205ENST00000466897 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
NPHP4-205ENST00000466897 A0A1W2PPE3 182 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 A0A1W2PRD5 423 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 A0A1W2PRF3 423 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 A0A1W2PRM7 423 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 VGLL3A8MV65 326 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 PPYP01298 95 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 IFNA6P05013 189 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 IL7P13232 177 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 FAUP35544 74 aaKnown RBP12.29□□□□□ -0.44
NPHP4-205ENST00000466897 LUMP51884 338 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-205ENST00000466897 TRIQKQ629K1 86 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 TMEM17Q86X19 198 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 LYG1Q8N1E2 194 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 OR6F1Q8NGZ6 308 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 RPEQ96AT9 228 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 MOB3AQ96BX8 217 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 TINAGL1Q9GZM7 467 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-205ENST00000466897 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 ZNRD1Q9P1U0 126 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 FAM96BQ9Y3D0 163 aa12.29□□□□□ -0.44
NPHP4-205ENST00000466897 SAA2-SAA4A0A096LPE2 208 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 M0QYG6 137 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 HSD17B6O14756 317 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 SAA2P0DJI9 122 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-205ENST00000466897 AADACP22760 399 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 DYNLT3P51808 116 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 ARHGDIBP52566 201 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 TSPAN5P62079 268 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 LHFPL1Q86WI0 220 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-205ENST00000466897 OR4C16Q8NGL9 310 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 RTN4IP1Q8WWV3 396 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-205ENST00000466897 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 TOMM40LQ969M1 308 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 ZNF2Q9BSG1 426 aaPredicted RBP12.28□□□□□ -0.44
NPHP4-205ENST00000466897 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
NPHP4-205ENST00000466897 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
NPHP4-205ENST00000466897 OR8U9P0C7N5 309 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 ECI1P42126 302 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 GPR12P47775 334 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 INPP1P49441 399 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 UCP3P55916 312 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 HERV-K104P61576 105 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 HABP2Q14520 560 aaPredicted RBP12.27□□□□□ -0.45
NPHP4-205ENST00000466897 SSX2Q16385 188 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF645Q8N7E2 425 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 OR8U1Q8NH10 309 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 C17orf50Q8WW18 174 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 ABHD14BQ96IU4 210 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 S1PR3Q99500 378 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 SLC6A7Q99884 636 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 PRRT1Q99946 306 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 C7orf50Q9BRJ6 194 aaKnown RBP12.27□□□□□ -0.45
NPHP4-205ENST00000466897 OR2D2Q9H210 308 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 RBM7Q9Y580 266 aaKnown RBP12.27□□□□□ -0.45
NPHP4-205ENST00000466897 MTORP42345 2549 aa12.27□□□□□ -0.45
NPHP4-205ENST00000466897 IGKV1D-13A0A0B4J2D9 117 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 A0A1W2PPI3 338 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 DISC1C4P0D8 188 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 AMY2AP04746 511 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 IGKV1-13P0DP09 117 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 AADACL3Q5VUY0 350 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 LPCAT3Q6P1A2 487 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 Q6YL49 198 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 TGIF2LXQ8IUE1 241 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 DYNAPQ8N1N2 210 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 TERB2Q8NHR7 220 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 C22orf15Q8WYQ4 148 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 ZNF48Q96MX3 618 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-205ENST00000466897 HRASLSQ9HDD0 168 aa12.26□□□□□ -0.45
NPHP4-205ENST00000466897 HILPDAQ9Y5L2 63 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms