RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FAM216BQ8N7L0 139 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 E7EQL1 145 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 CHST1O43916 411 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 PITX3O75364 302 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 IRF2P14316 349 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 EIF4EBP1Q13541 118 aaPredicted RBP11.26□□□□□ -0.61
UBE4B-206ENST00000466379 CDSNQ15517 529 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 Q3ZCU0 254 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 RNF141Q8WVD5 230 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 TAS2R3Q9NYW6 316 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 GNG12Q9UBI6 72 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 SESN1Q9Y6P5 492 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 CHD8Q9HCK8 2581 aa11.26□□□□□ -0.61
UBE4B-206ENST00000466379 NCOR2Q9Y618 2525 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 C17orf98A8MV24 154 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 A8MXK9 166 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 H3BP45 60 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 WRBO00258 174 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 JTBO76095 146 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 PVALBP20472 110 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 HTD2P86397 168 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 LY6DQ14210 128 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 CLINT1Q14677 625 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 NCMAPQ5T1S8 102 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 TRAT1Q6PIZ9 186 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 HSD17B13Q7Z5P4 300 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF561Q8N587 486 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 KDF1Q8NAX2 398 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 Q8TCH9 128 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 TCTEX1D2Q8WW35 142 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 SEBOXQ9HB31 216 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 A0A1B0GU03 582 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 PLAUP00749 431 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 BRWD1-AS2P59051 145 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 CCDC28AQ8IWP9 274 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
UBE4B-206ENST00000466379 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 POLEQ07864 2286 aa11.25□□□□□ -0.61
UBE4B-206ENST00000466379 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-206ENST00000466379 LINC00473A8K010 186 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 KIAA1324LA8MWY0 1029 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-206ENST00000466379 CST7O76096 145 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 S1PR2O95136 353 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ADH4P08319 380 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ATF4P18848 351 aaPredicted RBP11.24□□□□□ -0.61
UBE4B-206ENST00000466379 GZMHP20718 246 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 G6PCP35575 357 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 PAX9P55771 341 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 MORN2Q502X0 79 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF295-AS1Q8N0V1 137 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ZBTB34Q8NCN2 500 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 LSM10Q969L4 123 aaKnown RBP11.24□□□□□ -0.61
UBE4B-206ENST00000466379 C14orf79Q96F83 325 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 AGMATQ9BSE5 352 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 NGBQ9NPG2 151 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 MED6O75586 246 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 CLDN1O95832 211 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 IAPPP10997 89 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ZP3P21754 424 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF134P52741 427 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 MST1LQ2TV78 715 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 SPAG16Q8N0X2 631 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 STPG2Q8N412 459 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 TMEM217Q8N7C4 229 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 SAP30LQ9HAJ7 183 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
UBE4B-206ENST00000466379 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 SLC31A2O15432 143 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 KRASP01116 189 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 CD55P08174 381 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 ID4P47928 161 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 LOXL3P58215 753 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 CR1LQ2VPA4 569 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 ZNF788Q6ZQV5 615 aa11.23□□□□□ -0.61
UBE4B-206ENST00000466379 ZCCHC14Q8WYQ9 949 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms