RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CT45A6P0DMU7 189 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 CT45A5P0DMU8 189 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 CT45A7P0DMV0 189 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 LIN54Q6MZP7 749 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 CDH26Q8IXH8 852 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 NKAIN3Q8N8D7 197 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 RCHY1Q96PM5 261 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 TOLLIPQ9H0E2 274 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 RAB9BQ9NP90 201 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 KCNIP1Q9NZI2 227 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 OR1A1Q9P1Q5 309 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 PSORS1C1Q9UIG5 152 aa15.89■□□□□ 0.13
COL6A1-203ENST00000466285 EFCAB10A6NFE3 127 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 CASQ2O14958 399 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-203ENST00000466285 NAPSAO96009 420 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 GLAP06280 429 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 FRMD6-AS1P0C7T7 363 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 CRIP2P52943 208 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-203ENST00000466285 WNT4P56705 351 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 RPS27AP62979 156 aaKnown RBP15.88■□□□□ 0.13
COL6A1-203ENST00000466285 CX3CL1P78423 397 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 ZNF554Q86TJ5 538 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 OR2AK2Q8NG84 335 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 UQCC2Q9BRT2 126 aa15.88■□□□□ 0.13
COL6A1-203ENST00000466285 CHCHD3Q9NX63 227 aaKnown RBP15.88■□□□□ 0.13
COL6A1-203ENST00000466285 H0YJW9 148 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 RRHO14718 337 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 MYL12BO14950 172 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 PROP1O75360 226 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 TAS2R43P59537 309 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 QRFPP83859 136 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 ZNF880Q6PDB4 577 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 NANOGP1Q8N7R0 232 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 FBLIM1Q8WUP2 373 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 GALMQ96C23 342 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 GFI1Q99684 422 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 FKBP14Q9NWM8 211 aa15.87■□□□□ 0.13
COL6A1-203ENST00000466285 NKX1-2Q9UD57 310 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-203ENST00000466285 RRP15Q9Y3B9 282 aaKnown RBP15.87■□□□□ 0.13
COL6A1-203ENST00000466285 LGALS1P09382 135 aaKnown RBP15.86■□□□□ 0.13
COL6A1-203ENST00000466285 DEFA5Q01523 94 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 LY6G6FQ5SQ64 297 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 CASC10Q5T4H9 136 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 TTC23Q5W5X9 447 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 SETD9Q8NE22 299 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 MS4A10Q96PG2 267 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 CLCC1Q96S66 551 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 CHCHD6Q9BRQ6 235 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 CNOT2Q9NZN8 540 aaKnown RBP15.86■□□□□ 0.13
COL6A1-203ENST00000466285 FOXA2Q9Y261 457 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-203ENST00000466285 HYDINQ4G0P3 5121 aa15.86■□□□□ 0.13
COL6A1-203ENST00000466285 LINC01619G3V211 115 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 C3orf84H3BNL1 204 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 GP9P14770 177 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 INSL3P51460 131 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 SSBP2P81877 361 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-203ENST00000466285 RBM48Q5RL73 367 aaKnown RBP15.85■□□□□ 0.13
COL6A1-203ENST00000466285 C1orf100Q5SVJ3 147 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 ZNF429Q86V71 674 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 DHRSXQ8N5I4 330 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 DRAXINQ8NBI3 349 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-203ENST00000466285 BPIFB6Q8NFQ5 453 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 MUC7Q8TAX7 377 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 SETD6Q8TBK2 473 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 AGMATQ9BSE5 352 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 TMED9Q9BVK6 235 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 TM2D1Q9BX74 207 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 TMEM59Q9BXS4 323 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 CST11Q9H112 138 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 KIAA1456Q9P272 454 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 SLC23A1Q9UHI7 598 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 NUBP2Q9Y5Y2 271 aa15.85■□□□□ 0.13
COL6A1-203ENST00000466285 TMEM14DPA8MWL7 114 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 SOCS1O15524 211 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 CD1AP06126 327 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 MED21Q13503 144 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 ACSM3Q53FZ2 586 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 OGFRL1Q5TC84 451 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-203ENST00000466285 ACSM6Q6P461 480 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 ABHD5Q8WTS1 349 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 NEDD4LQ96PU5 975 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 AK3Q9UIJ7 227 aa15.84■□□□□ 0.13
COL6A1-203ENST00000466285 LSM2Q9Y333 95 aaKnown RBP15.84■□□□□ 0.13
COL6A1-203ENST00000466285 RGS11O94810 467 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 CA2P00918 260 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 IGKV1-16P04430 117 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 P2RY14Q15391 338 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 SRSF7Q16629 238 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-203ENST00000466285 FAM71F2Q6NXP2 309 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 C11orf54Q9H0W9 315 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-203ENST00000466285 LPAR5Q9H1C0 372 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 CHMP1AQ9HD42 196 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-203ENST00000466285 GHRLQ9UBU3 117 aa15.83■□□□□ 0.12
COL6A1-203ENST00000466285 IGKV1-6A0A0C4DH72 117 aa15.82■□□□□ 0.12
COL6A1-203ENST00000466285 FOXI3A8MTJ6 420 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-203ENST00000466285 ARPC1BO15143 372 aaKnown RBP15.82■□□□□ 0.12
COL6A1-203ENST00000466285 SLC22A1O15245 554 aa15.82■□□□□ 0.12
COL6A1-203ENST00000466285 MAPK3P27361 379 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-203ENST00000466285 HLA-DRB3P79483 266 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms