RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RCC1P18754 421 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-215ENST00000465457 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
HDAC6-215ENST00000465457 OR3A1P47881 315 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 COL10A1Q03692 680 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 MSMO1Q15800 293 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 ESCO2Q56NI9 601 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 C1orf87Q8N0U7 546 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 LGI3Q8N145 548 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 CLDND2Q8NHS1 167 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 THAP6Q8TBB0 222 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 AKR1E2Q96JD6 320 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 C2orf50Q96LR7 162 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 SLC5A7Q9GZV3 580 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 METTL8Q9H825 291 aaKnown RBP11.43□□□□□ -0.58
HDAC6-215ENST00000465457 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
HDAC6-215ENST00000465457 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 IGKV1-6A0A0C4DH72 117 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 FAM25EA8MYX2 175 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 B9A039 149 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-215ENST00000465457 MSMBP08118 114 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 PSG2P11465 335 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 GABRA2P47869 451 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 ZNF345Q14585 488 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 KRBOX4Q5JUW0 171 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 OR5D13Q8NGL4 314 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 GALMQ96C23 342 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 TOLLIPQ9H0E2 274 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 FAM234AQ9H0X4 552 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 MS4A5Q9H3V2 200 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 TAF9BQ9HBM6 251 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 GCM1Q9NP62 436 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 PPP1R3CQ9UQK1 317 aa11.42□□□□□ -0.58
HDAC6-215ENST00000465457 IGKV1D-17A0A075B6S4 117 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 A0A0D9SG52 128 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 C13orf42A0A1B0GVH6 325 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 CCSO14618 274 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 MPPED1O15442 326 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 SPINT2O43291 252 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 HSPA12AO43301 675 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 ZNF737O75373 536 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 PSMB6P28072 239 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 GNRHRP30968 328 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 CEBPDP49716 269 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-215ENST00000465457 LUMP51884 338 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-215ENST00000465457 UBA52P62987 128 aaKnown RBP11.41□□□□□ -0.58
HDAC6-215ENST00000465457 TMEM187Q14656 261 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 LGALSLQ3ZCW2 172 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-215ENST00000465457 PHLDA2Q53GA4 152 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 TEX36Q5VZQ5 186 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 ZBTB34Q8NCN2 500 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 PPP1R1CQ8WVI7 109 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 IL1F10Q8WWZ1 152 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 C22orf15Q8WYQ4 148 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 IL22RA2Q969J5 263 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 SDSLQ96GA7 329 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 DYNLRB1Q9NP97 96 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 KIF25Q9UIL4 384 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 TMED3Q9Y3Q3 217 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 PPIAL4AQ9Y536 164 aa11.41□□□□□ -0.58
HDAC6-215ENST00000465457 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 ARPC5O15511 151 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 OR2F2O95006 317 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 OR5AC1P0C628 307 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 GZMHP20718 246 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 S100A11P31949 105 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 OR2F1Q13607 317 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 Q5BKY6 102 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 STUMQ69YW2 141 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 ZNF546Q86UE3 836 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 CD177Q8N6Q3 437 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 BVESQ8NE79 360 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 OR10V1Q8NGI7 309 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 ANGPTL6Q8NI99 470 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 COQ2Q96H96 371 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 SPIN2AQ99865 258 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 SPIN2BQ9BPZ2 258 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 OR6C3Q9NZP0 311 aa11.4□□□□□ -0.58
HDAC6-215ENST00000465457 TRAV14DV4A0A0A6YYC5 116 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 C12orf77C9JDV5 145 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 H0Y980 276 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 K7N7A8 449 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 MPC2O95563 127 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 IFNA7P01567 189 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 HKR1P10072 659 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 P2RX3P56373 397 aa11.39□□□□□ -0.59
HDAC6-215ENST00000465457 HTD2P86397 168 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms