RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 PIPOXQ9P0Z9 390 aa10.38□□□□□ -0.75
COL28A1-206ENST00000465339 SLC23A1Q9UHI7 598 aa10.38□□□□□ -0.75
COL28A1-206ENST00000465339 A0A075B6Q4 140 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 RAB29O14966 203 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 MOSP00540 346 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 SCTP09683 121 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 CLEC2LP0C7M8 214 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 TALDO1P37837 337 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 SERPINB10P48595 397 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 ARFRP1Q13795 201 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 KIR2DS1Q14954 304 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 SRSF7Q16629 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
COL28A1-206ENST00000465339 CDNFQ49AH0 187 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 IDNKQ5T6J7 187 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 SAMD5Q5TGI4 173 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 ZNF833PQ6ZTB9 187 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 CENPVQ7Z7K6 275 aaPredicted RBP10.37□□□□□ -0.75
COL28A1-206ENST00000465339 Q8N6K4 173 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 OR8H1Q8NGG4 311 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 OR4A4PQ8NGN8 299 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 S1PR3Q99500 378 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
COL28A1-206ENST00000465339 WNK1Q9H4A3 2382 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 DIRAS3O95661 229 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 FCGR3AP08637 254 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 GSTP1P09211 210 aaKnown RBP10.36□□□□□ -0.75
COL28A1-206ENST00000465339 CD33P20138 364 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 PITPNAQ00169 270 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 C2orf68Q2NKX9 166 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 LGALS14Q8TCE9 139 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 WIPF2Q8TF74 440 aaPredicted RBP10.36□□□□□ -0.75
COL28A1-206ENST00000465339 PHF21AQ96BD5 680 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 AGMATQ9BSE5 352 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 TOLLIPQ9H0E2 274 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 IFI27L2Q9H2X8 130 aa10.36□□□□□ -0.75
COL28A1-206ENST00000465339 SAA2-SAA4A0A096LPE2 208 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 NCBP2LA6PVI3 153 aaKnown RBP10.35□□□□□ -0.75
COL28A1-206ENST00000465339 ZNF736B4DX44 427 aaPredicted RBP10.35□□□□□ -0.75
COL28A1-206ENST00000465339 FABP7O15540 132 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 SAA2P0DJI9 122 aaPredicted RBP10.35□□□□□ -0.75
COL28A1-206ENST00000465339 OR3A3P47888 321 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 LSAMPQ13449 338 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 TMEM95Q3KNT9 176 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 Q6ZS49 121 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 C11orf44Q8N8P7 122 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 OR5AU1Q8NGC0 362 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 NABP2Q9BQ15 211 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 C11orf54Q9H0W9 315 aaPredicted RBP10.35□□□□□ -0.75
COL28A1-206ENST00000465339 DCSTAMPQ9H295 470 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 MMP27Q9H306 513 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 PLSCR3Q9NRY6 295 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 LIN7CQ9NUP9 197 aaKnown RBP10.35□□□□□ -0.75
COL28A1-206ENST00000465339 RHBDL2Q9NX52 303 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 OR1A1Q9P1Q5 309 aa10.35□□□□□ -0.75
COL28A1-206ENST00000465339 VWFP04275 2813 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 A0A0A6YYH2 397 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 IGKV1-6A0A0C4DH72 117 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 A6NJ64 397 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 SH2D7A6NKC9 451 aaPredicted RBP10.34□□□□□ -0.75
COL28A1-206ENST00000465339 IGHG2P01859 326 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 CSF1P09603 554 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 GSTT2P0CG29 244 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 GSTT2BP0CG30 244 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 DTYMKP23919 212 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 MC5RP33032 325 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 RPS19P39019 145 aaKnown RBP10.34□□□□□ -0.75
COL28A1-206ENST00000465339 PNLIPRP3Q17RR3 467 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 OR10J5Q8NHC4 309 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 RASL11BQ9BPW5 248 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 ZNF251Q9BRH9 671 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 MRPL20Q9BYC9 149 aaKnown RBP10.34□□□□□ -0.75
COL28A1-206ENST00000465339 RDH8Q9NYR8 311 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 ZNF230Q9UIE0 474 aaPredicted RBP10.34□□□□□ -0.75
COL28A1-206ENST00000465339 ZNF221Q9UK13 617 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 SPATA2Q9UM82 520 aa10.34□□□□□ -0.75
COL28A1-206ENST00000465339 TRBV6-7A0A0A0MS04 114 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 BET1O15155 118 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 CD28P10747 220 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 LSM3P62310 102 aaKnown RBP10.33□□□□□ -0.76
COL28A1-206ENST00000465339 ZNF260Q3ZCT1 412 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 SLC35E3Q7Z769 313 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 FOXRED2Q8IWF2 684 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 Q8N9W7 124 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 OR13F1Q8NGS4 319 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 OR5H6Q8NGV6 325 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 CHPT1Q8WUD6 406 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 ABHD14BQ96IU4 210 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 CABLES2Q9BTV7 478 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 FUNDC2Q9BWH2 189 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
COL28A1-206ENST00000465339 ABCG5Q9H222 651 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 DIABLOQ9NR28 239 aa10.33□□□□□ -0.76
COL28A1-206ENST00000465339 OR5H14A6NHG9 310 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms