RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 OR13C9Q8NGT0 318 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 PDCD1LG2Q9BQ51 273 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 OGG1O15527 345 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 TNFAIP8O95379 198 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 TRBV12-3P01733 135 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 TRGV3P03979 118 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 HSMCR30P0CW71 290 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 TMEM225BP0DP42 221 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 CCR9P51686 369 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 CX3CL1P78423 397 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 RPL22L1Q6P5R6 122 aaKnown RBP11.26□□□□□ -0.61
HDAC6-214ENST00000465269 OR10K1Q8NGX5 313 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 OR5AK2Q8NH90 309 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF251Q9BRH9 671 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 MRPL20Q9BYC9 149 aaKnown RBP11.26□□□□□ -0.61
HDAC6-214ENST00000465269 FBXL15Q9H469 300 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 NCOR1P1Q9H4R4 102 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 LSM2Q9Y333 95 aaKnown RBP11.26□□□□□ -0.61
HDAC6-214ENST00000465269 KLK5Q9Y337 293 aaPredicted RBP11.26□□□□□ -0.61
HDAC6-214ENST00000465269 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF785A8K8V0 405 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 MRPS14O60783 128 aaKnown RBP11.25□□□□□ -0.61
HDAC6-214ENST00000465269 OCM2P0CE71 109 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF20P17024 532 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 CELP19835 753 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 KCTD21Q4G0X4 260 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 ACTBL2Q562R1 376 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 UTS2BQ765I0 119 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 C5orf24Q7Z6I8 188 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 SVOPQ8N4V2 548 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 SPSB1Q96BD6 273 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 RANGRFQ9HD47 186 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-214ENST00000465269 ACOT13Q9NPJ3 140 aa11.25□□□□□ -0.61
HDAC6-214ENST00000465269 TMEM212A6NML5 194 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 TXNL1O43396 289 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 UBCP0CG48 685 aaKnown RBP11.24□□□□□ -0.61
HDAC6-214ENST00000465269 EDN2P20800 178 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 ZP3P21754 424 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF137PP52743 207 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-214ENST00000465269 TAS2R43P59537 309 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-214ENST00000465269 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-214ENST00000465269 LYG2Q86SG7 212 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 SUMF2Q8NBJ7 301 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 OR51A4Q8NGJ6 313 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 GHSRQ92847 366 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 MGLLQ99685 303 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 DPCDQ9BVM2 203 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-214ENST00000465269 SLC23A1Q9UHI7 598 aa11.24□□□□□ -0.61
HDAC6-214ENST00000465269 ISG15P05161 165 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 MECP2P51608 486 aaKnown RBP11.23□□□□□ -0.61
HDAC6-214ENST00000465269 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-214ENST00000465269 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 OR52M1Q8NGK5 317 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 OR13C3Q8NGS6 347 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 OR13C5Q8NGS8 318 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 CST11Q9H112 138 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
HDAC6-214ENST00000465269 A0A087WXM4 84 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
HDAC6-214ENST00000465269 GZMHP20718 246 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 SOX2P48431 317 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 NEDD8Q15843 81 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 LIPKQ5VXJ0 399 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 ZNF367Q7RTV3 350 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 PRR18Q8N4B5 295 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 NPBQ8NG41 125 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 OR1L1Q8NH94 360 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 PHLDA1Q8WV24 401 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-214ENST00000465269 TSEN15Q8WW01 171 aaKnown RBP11.22□□□□□ -0.61
HDAC6-214ENST00000465269 C10orf35Q96D05 121 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 PGLYRP3Q96LB9 341 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 PARP12Q9H0J9 701 aaKnown RBP11.22□□□□□ -0.61
HDAC6-214ENST00000465269 SLC2A8Q9NY64 477 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
HDAC6-214ENST00000465269 TMEM30CPA0ZSE6 113 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 ARPC1BO15143 372 aaKnown RBP11.21□□□□□ -0.61
HDAC6-214ENST00000465269 LANCL1O43813 399 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 NDUFA3O95167 84 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 CSTBP04080 98 aaKnown RBP11.21□□□□□ -0.61
HDAC6-214ENST00000465269 PSMB9P28065 219 aa11.21□□□□□ -0.61
HDAC6-214ENST00000465269 OR3A3P47888 321 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms