RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 PTHLHP12272 177 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 OR3A3P47888 321 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 C16orf82Q7Z2V1 217 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 LINC01006Q8NI28 216 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 ISOC1Q96CN7 298 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 AKR1E2Q96JD6 320 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 RBM14Q96PK6 669 aaKnown RBP11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 AGMATQ9BSE5 352 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 TOLLIPQ9H0E2 274 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 RANBP3Q9H6Z4 567 aaPredicted RBP11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
SQSTM1-205ENST00000464493 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 H3BMQ9 156 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 OR2F2O95006 317 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 IGKV1D-33P01593 117 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 IGKV1-33P01594 117 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 CTXN2P0C2S0 81 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 ELK1P19419 428 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 CD1BP29016 333 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 TAS2R20P59543 309 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 HES1Q14469 280 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 FBLN7Q53RD9 439 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 ZNF833PQ6ZTB9 187 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 DYNC2LI1Q8TCX1 351 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 ABHD14BQ96IU4 210 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 S1PR3Q99500 378 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 ANXA10Q9UJ72 324 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 RNF150Q9ULK6 438 aa11.61□□□□□ -0.55
SQSTM1-205ENST00000464493 ZNF736B4DX44 427 aaPredicted RBP11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 TMEM11P17152 192 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 CBX5P45973 191 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 BLCAPP62952 87 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 EBI3Q14213 229 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 HNF4GQ14541 408 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 FAM71F2Q6NXP2 309 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 CNIH2Q6PI25 160 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 HOGA1Q86XE5 327 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 GVQW1Q8N7I0 195 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 BEST4Q8NFU0 473 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 ZNF251Q9BRH9 671 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 PRSS22Q9GZN4 317 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 MRPS7Q9Y2R9 242 aaKnown RBP11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
SQSTM1-205ENST00000464493 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 FAM25AB3EWG3 89 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 FAM25CB3EWG5 89 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 FAM25GB3EWG6 89 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 HLA-DQB1P01920 261 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 PRSS3P35030 304 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 RPL39P5Q59GN2 51 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 OR2T10Q8NGZ9 312 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 OR2T6Q8NHC8 308 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 EAF1Q96JC9 268 aaPredicted RBP11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 ZNF747Q9BV97 191 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 MRPL20Q9BYC9 149 aaKnown RBP11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 CCDC59Q9P031 241 aaKnown RBP11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 ZNF221Q9UK13 617 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 DNHD1Q96M86 4753 aa11.59□□□□□ -0.55
SQSTM1-205ENST00000464493 MEIS3P1A6NDR6 274 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 M0QZK8 103 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 MOSP00540 346 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 GPR12P47775 334 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 ARPC4P59998 168 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 LSAMPQ13449 338 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 Q8N2B8 174 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 ZNF702PQ9H963 129 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 SIGLEC9Q9Y336 463 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 MOB4Q9Y3A3 225 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 RBM7Q9Y580 266 aaKnown RBP11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 ANK2Q01484 3957 aa11.58□□□□□ -0.56
SQSTM1-205ENST00000464493 HAX1O00165 279 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 CTDSP2O14595 271 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 RGS5O15539 181 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 AMY1AP04745 511 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 AMY2AP04746 511 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 FCER2P06734 321 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 CT45A6P0DMU7 189 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 CT45A5P0DMU8 189 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 CT45A7P0DMV0 189 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 NFYAP23511 347 aaPredicted RBP11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 PROK1P58294 105 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 ABCA11PQ4W5N1 156 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 Q6ZS46 218 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 SNX29P2Q8IUI4 249 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 Q8N6K4 173 aa11.57□□□□□ -0.56
SQSTM1-205ENST00000464493 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms