RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CHD5Q8TDI0 1954 aa2.3□□□□□ -2.04
USH2A-203ENST00000463147 GCC2Q8IWJ2 1684 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 THSD7AQ9UPZ6 1657 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 SYNMO15061 1565 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 KDM5CP41229 1560 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 SNAPC4Q5SXM2 1469 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 CCDC141Q6ZP82 1450 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ZFYVE9O95405 1425 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 FGD6Q6ZV73 1430 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 IGLV4-60A0A075B6I1 120 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 C4orf51C9J302 202 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 SSNA1O43805 119 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 STX10O60499 249 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 PDYNP01213 254 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 HBZP02008 142 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 FBP1P09467 338 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 LINC00614P0C842 121 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 IDO1P14902 403 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 CTLA4P16410 223 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ORM2P19652 201 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 CEBPGP53567 150 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ARPC4P59998 168 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 GNGT1P63211 74 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 STX5Q13190 355 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ACSM3Q53FZ2 586 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 LDLRAD2Q5SZI1 272 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 OGFRL1Q5TC84 451 aaPredicted RBP2.29□□□□□ -2.04
USH2A-203ENST00000463147 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 COMMD7Q86VX2 200 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ZNF567Q8N184 647 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 OR5K1Q8NHB7 308 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 CYGBQ8WWM9 190 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 TESCQ96BS2 214 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 OPTNQ96CV9 577 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 CHMP6Q96FZ7 201 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 ACY3Q96HD9 319 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 MRPS26Q9BYN8 205 aaKnown RBP2.29□□□□□ -2.04
USH2A-203ENST00000463147 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 GLS2Q9UI32 602 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 LINC00527Q9UJ94 153 aa2.29□□□□□ -2.04
USH2A-203ENST00000463147 PRDM15P57071 1507 aaPredicted RBP2.28□□□□□ -2.04
USH2A-203ENST00000463147 ABCA10Q8WWZ4 1543 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 ABCC2Q92887 1545 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 GRIN2AQ12879 1464 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 TEX14Q8IWB6 1497 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 NPATQ14207 1427 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 C9orf84Q5VXU9 1444 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 PPIP5K1Q6PFW1 1433 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 TRAV40A0A0B4J280 105 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 ARGFXA6NJG6 315 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 H3BQ85 93 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 K7ERS5 55 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 CALB1P05937 261 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 RPS17P08708 135 aaKnown RBP2.28□□□□□ -2.04
USH2A-203ENST00000463147 PSMA1P25786 263 aaKnown RBP2.28□□□□□ -2.04
USH2A-203ENST00000463147 PMELP40967 661 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 KRTAP10-10P60014 251 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 LSM6P62312 80 aaKnown RBP2.28□□□□□ -2.04
USH2A-203ENST00000463147 BSPH1Q075Z2 132 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 FADDQ13158 208 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 KRTAP13-2Q52LG2 175 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 C1orf195Q5TG92 126 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 SYPL2Q5VXT5 272 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 NEGR1Q7Z3B1 354 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 ATP5L2Q7Z4Y8 100 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 NAA40Q86UY6 237 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 SGPP2Q8IWX5 399 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 OR1M1Q8NGA1 313 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 GALMQ96C23 342 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 CMBLQ96DG6 245 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 SEC22CQ9BRL7 303 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 INIPQ9NRY2 104 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 EMC3Q9P0I2 261 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 OR5V1Q9UGF6 321 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 MRPS16Q9Y3D3 137 aaKnown RBP2.28□□□□□ -2.04
USH2A-203ENST00000463147 HDGFL3Q9Y3E1 203 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 LINC00588Q9Y4M8 146 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 PHLDA3Q9Y5J5 127 aa2.28□□□□□ -2.04
USH2A-203ENST00000463147 KDM5DQ9BY66 1539 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 TCOF1Q13428 1488 aaKnown RBP2.27□□□□□ -2.05
USH2A-203ENST00000463147 RALGAPBQ86X10 1494 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 PRXQ9BXM0 1461 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 ANKRD50Q9ULJ7 1429 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 RTL1A6NKG5 1358 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 IGKV1D-37A0A075B6S9 117 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 A6NED7 52 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 B4DEV8 164 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 H3BMM0 161 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 LECT2O14960 151 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 ISG15P05161 165 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 CD36P16671 472 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 S100A1P23297 94 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 HSPA9P38646 679 aaKnown RBP2.27□□□□□ -2.05
USH2A-203ENST00000463147 DAPP51397 102 aa2.27□□□□□ -2.05
USH2A-203ENST00000463147 AP2S1P53680 142 aaPredicted RBP2.27□□□□□ -2.05
USH2A-203ENST00000463147 GABARAPL2P60520 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms