RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 OR2AK2Q8NG84 335 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 CHPT1Q8WUD6 406 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 C5orf30Q96GV9 206 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF251Q9BRH9 671 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 GHITMQ9H3K2 345 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 COPZ2Q9P299 210 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 VSIG4Q9Y279 399 aa11.67□□□□□ -0.54
COL6A1-202ENST00000463060 ACANP16112 2415 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 FSHBP01225 129 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 ECI1P42126 302 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 GNG10P50151 68 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 RAB7AP51149 207 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
COL6A1-202ENST00000463060 UBE2E1P51965 193 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 FXYD4P59646 89 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-202ENST00000463060 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 SECTM1Q8WVN6 248 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 AJUBAQ96IF1 538 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 ABHD14BQ96IU4 210 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 SLC5A7Q9GZV3 580 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 MMP28Q9H239 520 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 FLVCR2Q9UPI3 526 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 CSPG4Q6UVK1 2322 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
COL6A1-202ENST00000463060 CD5LO43866 347 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 SLC22A5O76082 557 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 CTSDP07339 412 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 COX7A1P24310 79 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 PRRX1P54821 245 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 BAMBIQ13145 260 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF818PQ6ZRF7 136 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 SLC38A6Q8IZM9 456 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 BVESQ8NE79 360 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 LHX4Q969G2 390 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 TOMM40LQ969M1 308 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ZNF486Q96H40 463 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 ALX4Q9H161 411 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-202ENST00000463060 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 SDHAF2Q9NX18 166 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 NUBP2Q9Y5Y2 271 aa11.65□□□□□ -0.54
COL6A1-202ENST00000463060 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
COL6A1-202ENST00000463060 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 TOR1AO14656 332 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 RAB29O14966 203 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 PI3P19957 117 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 RAG2P55895 527 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 RND3P61587 244 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 CCBE1Q6UXH8 406 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-202ENST00000463060 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 ADAD2Q8NCV1 583 aaKnown RBP11.64□□□□□ -0.55
COL6A1-202ENST00000463060 ENKURQ8TC29 256 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 ZFAND1Q8TCF1 268 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 TMEM230Q96A57 120 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 SCGB3A2Q96PL1 93 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 OR2D2Q9H210 308 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 ZNF221Q9UK13 617 aa11.64□□□□□ -0.55
COL6A1-202ENST00000463060 IGHV1-69DA0A0B4J2H0 117 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 GPR31O00270 319 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 PGLYRP1O75594 196 aaPredicted RBP11.63□□□□□ -0.55
COL6A1-202ENST00000463060 IGHV1-69P01742 117 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 PGAM2P15259 253 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 FOSL1P15407 271 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 DHODHQ02127 395 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 SLC25A42Q86VD7 318 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 CENPSQ8N2Z9 138 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 MINDY2Q8NBR6 621 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 C20orf85Q9H1P6 137 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 NUDT15Q9NV35 164 aa11.63□□□□□ -0.55
COL6A1-202ENST00000463060 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
COL6A1-202ENST00000463060 SAA2-SAA4A0A096LPE2 208 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 HSD17B6O14756 317 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 ARPC1BO15143 372 aaKnown RBP11.62□□□□□ -0.55
COL6A1-202ENST00000463060 ARG1P05089 322 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 H2AFB2P0C5Z0 115 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 SAA2P0DJI9 122 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-202ENST00000463060 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
COL6A1-202ENST00000463060 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms