RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 HIST1H2BLQ99880 126 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 PROCRQ9UNN8 238 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 FABP2P12104 132 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 PLA2G2FQ9BZM2 168 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 CYTL1Q9NRR1 136 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 ICAM4Q14773 271 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 IL36GQ9NZH8 169 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 SCN3AQ9NY46 2000 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 DPRXA6NFQ7 191 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 SRIP30626 198 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 Q1RN00 199 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 COL11A1P12107 1806 aaPredicted RBP13.66□□□□□ -0.22
SMC4-204ENST00000462787 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 A8MWL6 223 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 NDUFS6O75380 124 aaKnown RBP13.66□□□□□ -0.22
SMC4-204ENST00000462787 C2orf88Q9BSF0 95 aa13.66□□□□□ -0.22
SMC4-204ENST00000462787 NPIPB7O75200 414 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 MRPS11P82912 194 aaKnown RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 MMD2Q8IY49 270 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 VSTM2AQ8TAG5 236 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 TBX6O95947 436 aaPredicted RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 GPX4P36969 197 aaPredicted RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 SLC35B1P78383 322 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 SSX8Q7RTT4 187 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 BEND2Q8NDZ0 799 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 LRRC29Q8WV35 223 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 CCL7P80098 99 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 CEACAM21Q3KPI0 293 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 MISP3Q96FF7 219 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 ZNF385AQ96PM9 386 aaKnown RBP13.65□□□□□ -0.22
SMC4-204ENST00000462787 TRAV9-1A0A075B6T8 112 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 A0A1B0GW64 132 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 SPINT1O43278 529 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 ORM2P19652 201 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 C10orf113Q5VZT2 155 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 FGFRL1Q8N441 504 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 OR2M7Q8NG81 312 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 SARAFQ96BY9 339 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 TMEM242Q9NWH2 141 aa13.65□□□□□ -0.22
SMC4-204ENST00000462787 K7N7A8 449 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 OR2J3O76001 311 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 IGLV3-21P80748 117 aaPredicted RBP13.64□□□□□ -0.23
SMC4-204ENST00000462787 IL11RAQ14626 422 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 F5P12259 2224 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 ZNF818PQ6ZRF7 136 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 OR2Z1Q8NG97 314 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 MST1P26927 711 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 TNFSF10P50591 281 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 ASPHD2Q6ICH7 369 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 PQLC2Q6ZP29 291 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 OR8A1Q8NGG7 326 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
SMC4-204ENST00000462787 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 OR52L2PQ8NGH6 319 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 PERPQ96FX8 193 aa13.64□□□□□ -0.23
SMC4-204ENST00000462787 CDIPTO14735 213 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 LGALS4P56470 323 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 SAPCD1Q5SSQ6 148 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 NFAM1Q8NET5 270 aaPredicted RBP13.63□□□□□ -0.23
SMC4-204ENST00000462787 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 K7EQS6 105 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 LYPD3O95274 346 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 RBP4P02753 201 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 PYY3Q5JQD4 70 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 SAXO1Q8IYX7 474 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
SMC4-204ENST00000462787 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 CBLN1P23435 193 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 TRAV38-1A0A0B4J264 116 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 LPAL2Q16609 132 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 OR1B1Q8NGR6 318 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 MYO7AQ13402 2215 aa13.63□□□□□ -0.23
SMC4-204ENST00000462787 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 SYNGR1O43759 233 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 MYF5P13349 255 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 BTF3P20290 206 aaKnown RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 SEBOXQ9HB31 216 aaPredicted RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 TMEM92Q6UXU6 159 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 ZNF645Q8N7E2 425 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 TMEM116Q8NCL8 245 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 GNB4Q9HAV0 340 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
SMC4-204ENST00000462787 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 TMEM210A6NLX4 147 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 M0R1B8 84 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 CLDN16Q9Y5I7 305 aa13.62□□□□□ -0.23
SMC4-204ENST00000462787 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms