RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 GALMQ96C23 342 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SAT2Q96F10 170 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SNX22Q96L94 193 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 TMEM56Q96MV1 263 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SEBOXQ9HB31 216 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 LSM5Q9Y4Y9 91 aaKnown RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 H0Y980 276 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 CD3EP07766 207 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 TLE1Q04724 770 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 C4orf17Q53FE4 359 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 EIF5AL1Q6IS14 154 aaKnown RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
HDAC6-213ENST00000462730 OR52L2PQ8NGH6 319 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 PPP1R35Q8TAP8 253 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 OR2S2Q9NQN1 319 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
HDAC6-213ENST00000462730 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.47
HDAC6-213ENST00000462730 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.48
HDAC6-213ENST00000462730 OR8U9P0C7N5 309 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 UCP1P25874 307 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 RPL35P42766 123 aaKnown RBP12.08□□□□□ -0.48
HDAC6-213ENST00000462730 RAB5BP61020 215 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 PAX5Q02548 391 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 GNMTQ14749 295 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 OR51H1Q8NH63 302 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 Q8TCH9 128 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 FAM222BQ8WU58 562 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 LURAP1Q96LR2 239 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 DCTN5Q9BTE1 182 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 HRH4Q9H3N8 390 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
HDAC6-213ENST00000462730 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 E7EQL1 145 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 MGST3O14880 152 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 SIAH2O43255 324 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 S100A9P06702 114 aaKnown RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 F2RP25116 425 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 SSTR5P35346 364 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 CCL8P80075 99 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 OR5D13Q8NGL4 314 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 FAM96BQ9Y3D0 163 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ICE1Q9Y2F5 2266 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ODAMA1E959 279 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ZG16O60844 167 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 DEDDO75618 318 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 CDS2O95674 445 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 CD55P08174 381 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 IRF2P14316 349 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 MUC1P15941 1255 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 CAV2P51636 162 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 KIAA2026Q5HYC2 2103 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-213ENST00000462730 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 ZNRF1Q8ND25 227 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 OR52M1Q8NGK5 317 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 NINJ1Q92982 152 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 RNF115Q9Y4L5 304 aa12.07□□□□□ -0.48
HDAC6-213ENST00000462730 HCFC1P51610 2035 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 CACNA1DQ01668 2161 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 K7EPK0 472 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 K7N7A8 449 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 PLAUP00749 431 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 ADH4P08319 380 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
HDAC6-213ENST00000462730 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 Q3ZCU0 254 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 TGIF2LYQ8IUE0 185 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 FAM71E2Q8N5Q1 922 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 ZNF251Q9BRH9 671 aa12.06□□□□□ -0.48
HDAC6-213ENST00000462730 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 TAAR5O14804 337 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SPINT2O43291 252 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 SELLP14151 372 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 TNFRSF1AP19438 455 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 LPAR6P43657 344 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 RNF212Q495C1 297 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 STUMQ69YW2 141 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
HDAC6-213ENST00000462730 ZCCHC24Q8N2G6 241 aaKnown RBP12.05□□□□□ -0.48
HDAC6-213ENST00000462730 DRAM1Q8N682 238 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 C15orf54Q8N8G6 183 aa12.05□□□□□ -0.48
HDAC6-213ENST00000462730 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms