RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-206ENST00000462613 ZNF439Q8NDP4 499 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 OR5AP2Q8NGF4 316 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 CT45A3Q8NHU0 189 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 GPX8Q8TED1 209 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 RTN4IP1Q8WWV3 396 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-206ENST00000462613 DUX5Q96PT3 197 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 NPFFR1Q9GZQ6 430 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 NXF2Q9GZY0 626 aaKnown RBP5.16□□□□□ -1.58
SF3B1-206ENST00000462613 OR2D2Q9H210 308 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 EHFQ9NZC4 300 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 C1RLQ9NZP8 487 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 OR1A1Q9P1Q5 309 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 ELF5Q9UKW6 265 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-206ENST00000462613 TCF19Q9Y242 345 aa5.16□□□□□ -1.58
SF3B1-206ENST00000462613 SAA2-SAA4A0A096LPE2 208 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 IGHV1-3A0A0C4DH29 117 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 A0A1B0GUS0 222 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR5H14A6NHG9 310 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF736B4DX44 427 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 H7C2Y5 167 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TIMM23O14925 209 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 SSX5O60225 188 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 GPR137BO60478 399 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 VENTXO95231 258 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 HLA-DQB1P01920 261 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 CSF1P09603 554 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR8U9P0C7N5 309 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 SAA2P0DJI9 122 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 PTHLHP12272 177 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TMEM11P17152 192 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 PTBP1P26599 531 aaKnown RBP eCLIP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 CD1BP29016 333 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 FCGR2CP31995 323 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TNFSF8P32971 234 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 MC5RP33032 325 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 FAUP35544 74 aaKnown RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 REG1BP48304 166 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TAS2R19P59542 299 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 AP3S2P59780 193 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TAGLNQ01995 201 aaKnown RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 FOXL1Q12952 345 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 HERPUD1Q15011 391 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 LY6EQ16553 131 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 PYDC2Q56P42 97 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 RNASE10Q5GAN6 216 aaKnown RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 THNSL2Q86YJ6 484 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 H1FOOQ8IZA3 346 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 GVQW1Q8N7I0 195 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 ZDHHC22Q8N966 263 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR4C13Q8NGP0 309 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR6F1Q8NGZ6 308 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR2T10Q8NGZ9 312 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR8U1Q8NH10 309 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR4F5Q8NH21 305 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR56B4Q8NH76 319 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 C17orf50Q8WW18 174 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 ABHD14BQ96IU4 210 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 ADTRPQ96IZ2 230 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 CHIAQ9BZP6 476 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 TOLLIPQ9H0E2 274 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 C11orf54Q9H0W9 315 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 MTFP1Q9UDX5 166 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF107Q9UII5 783 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 OR2W1Q9Y3N9 320 aa5.15□□□□□ -1.59
SF3B1-206ENST00000462613 SOX21Q9Y651 276 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1D-8A0A087WSZ0 117 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1-6A0A0C4DH72 117 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 A0A1W2PPI3 338 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 FAM181BA6NEQ2 426 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 LY6LH3BQJ8 138 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 M0R1X1 148 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 CTDSPLO15194 276 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 SLC31A2O15432 143 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 MOSP00540 346 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1D-33P01593 117 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1-33P01594 117 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 PMP2P02689 132 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 FCER2P06734 321 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 SNRNP70P08621 437 aaKnown RBP5.14□□□□□ -1.59
SF3B1-206ENST00000462613 RRASP10301 218 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 NAT1P18440 290 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 NFYAP23511 347 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-206ENST00000462613 HLA-DMAP28067 261 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 HRH1P35367 487 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 THBS3P49746 956 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF134P52741 427 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 FXYD4P59646 89 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 CATR1Q13166 79 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 LSAMPQ13449 338 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 DYRK1AQ13627 763 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 MEF2DQ14814 521 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 RTL8BQ17RB0 113 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 TUSC1Q2TAM9 212 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 KRTAP21-3Q3LHN1 58 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 Q6ZPA2 131 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 LINC00299Q6ZSB3 139 aa5.14□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF833PQ6ZTB9 187 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms