RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 UNQ5815/PRO19632Q6UWF5 114 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 COX14Q96I36 57 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 DUX5Q96PT3 197 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 MIXL1Q9H2W2 232 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 LPAR2Q9HBW0 351 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 hCG_38984A0A1B0GV85 526 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 C7orf71A4D174 169 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 CCL21O00585 134 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 CISD3P0C7P0 127 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 ZNF56Q15929 161 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 VCX2Q9H322 139 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 RGPD8O14715 1765 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-205ENST00000461221 TRAV8-7A0A075B6U6 113 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 RECKO95980 971 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 PEX11BO96011 259 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 COX6B1P14854 86 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 ZNF250P15622 560 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 CEACAM21Q3KPI0 293 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 C19orf24Q9BVV8 132 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 WNT5BQ9H1J7 359 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 WDR54Q9H977 334 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 SERGEFQ9UGK8 458 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 KLK13Q9UKR3 277 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 C5P01031 1676 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 A0A1W2PPE3 182 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A26D6RGX4 464 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 NDUFA2O43678 99 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 RCC1P18754 421 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-205ENST00000461221 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
BRCA1-205ENST00000461221 ZNF506Q5JVG8 444 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 PCSK4Q6UW60 755 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 RARRES2Q99969 163 aa7.81□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A10PA6NDY2 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A18PA6NE21 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A16PA6NEW6 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A20PA6NIJ5 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A8PA6NJQ4 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A7PA6NKC0 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A22PA8MWA6 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A12PA8MX19 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A5PA8MXJ8 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A23PA8MXZ1 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 H7C1H1 209 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 IGHV4-34P06331 123 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 GPX1P07203 203 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A15PP0C7V4 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A13PP0C7W8 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A14PP0C7W9 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FAM90A24PP0C7X0 464 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 ZFP36L2P47974 494 aaKnown RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 HIST1H1AQ02539 215 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 ATP5G2Q06055 141 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM30BQ3MIR4 351 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 OR4D5Q8NGN0 318 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 LINC00470Q9BZP3 86 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 RBKSQ9H477 322 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 IGKV3D-11A0A0A0MRZ8 115 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 A0A0U1RQV5 110 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 CXorf65A6NEN9 183 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 C1QTNF9BB2RNN3 333 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 IGKV3-11P04433 115 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 MUC1P15941 1255 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FGF12P61328 243 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 PSG6Q00889 435 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 LINC00469Q8N7U9 141 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 PARLQ9H300 379 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 CISD1Q9NZ45 108 aaKnown RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 R4GN57 208 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 SLC25A17O43808 307 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 HYAL3O43820 417 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 TRGC2P03986 189 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 GGTLC2Q14390 218 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 SFXN3Q9BWM7 321 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FSCN3Q9NQT6 498 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 HILPDAQ9Y5L2 63 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 F11RQ9Y624 299 aaKnown RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 PHIPQ8WWQ0 1821 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 TRAV39A0A0B4J263 110 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 OR11H12B2RN74 326 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 GDF9O60383 454 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 FCARP24071 287 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 MGAT2Q10469 447 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 ZP4Q12836 540 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 KRTCAP3Q53RY4 240 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM252Q8N6L7 170 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 OR11H1Q8NG94 326 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 OR11H2Q8NH07 326 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 TMEM222Q9H0R3 208 aa7.8□□□□□ -1.16
BRCA1-205ENST00000461221 PEF1Q9UBV8 284 aaKnown RBP7.8□□□□□ -1.16
BRCA1-205ENST00000461221 ASAH2BP0C7U1 165 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 C8orf88P0DMB2 117 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 CCL3P10147 92 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 FSTP19883 344 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 SPINK2P20155 84 aa7.79□□□□□ -1.16
BRCA1-205ENST00000461221 FCGR2BP31994 310 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms