RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TNFSF10P50591 281 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 OR5I1Q13606 314 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 SLC25A22Q9H936 323 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 ZNF292O60281 2723 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 IGHV1OR21-1A0A087WYE8 117 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 CMTM2Q8TAZ6 248 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 BTF3L4Q96K17 158 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 ADAMTS20P59510 1910 aa13.17□□□□□ -0.3
SSR4-206ENST00000460616 WDFY3Q8IZQ1 3526 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 HSPB6O14558 160 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 YPEL1O60688 119 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 NEK7Q8TDX7 302 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 NEIL1Q96FI4 390 aaPredicted RBP13.16□□□□□ -0.3
SSR4-206ENST00000460616 YPEL2Q96QA6 119 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 ATP23Q9Y6H3 246 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 CTXND1A0A1B0GTU2 59 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 PATE4P0C8F1 98 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 CD59P13987 128 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 CD82P27701 267 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 CLDN15P56746 228 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 SOX8P57073 446 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
SSR4-206ENST00000460616 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 TEX43Q6ZNM6 134 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
SSR4-206ENST00000460616 hCG_38984A0A1B0GV85 526 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A10PA6NDY2 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A18PA6NE21 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A16PA6NEW6 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A20PA6NIJ5 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A8PA6NJQ4 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A7PA6NKC0 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A22PA8MWA6 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A12PA8MX19 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A5PA8MXJ8 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A23PA8MXZ1 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 PAGE4O60829 102 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A15PP0C7V4 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A13PP0C7W8 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A14PP0C7W9 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FAM90A24PP0C7X0 464 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 PPP1CBP62140 327 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
SSR4-206ENST00000460616 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 OR8G2PQ6IF36 304 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 ACSM6Q6P461 480 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 OR10G9Q8NGN4 311 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 OR10G7Q8NGN6 311 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 LSM10Q969L4 123 aaKnown RBP13.15□□□□□ -0.3
SSR4-206ENST00000460616 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 ZNF816-ZNF321PA0A0X1KG74 233 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 A0A1W2PQM1 296 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 SIAH2O43255 324 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 VAMP5O95183 116 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 UMODP07911 640 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 BCL3P20749 454 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 Q6ZWC4 215 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 TMEM144Q7Z5S9 345 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 CARFQ8N187 725 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 FGF21Q9NSA1 209 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 ERRFI1Q9UJM3 462 aaPredicted RBP13.15□□□□□ -0.3
SSR4-206ENST00000460616 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
SSR4-206ENST00000460616 MED12Q93074 2177 aa13.15□□□□□ -0.31
SSR4-206ENST00000460616 CHD3Q12873 2000 aaKnown RBP13.14□□□□□ -0.31
SSR4-206ENST00000460616 C1QTNF9BB2RNN3 333 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 ZNF883P0CG24 379 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 EDN3P14138 238 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 TPPP2P59282 170 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 FOXL1Q12952 345 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 PCSK4Q6UW60 755 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 IFI44Q8TCB0 444 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 ASCL3Q9NQ33 180 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 TMEM9BQ9NQ34 198 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 AURKAIP1Q9NWT8 199 aaPredicted RBP13.14□□□□□ -0.31
SSR4-206ENST00000460616 A0A1W2PR80 420 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 TCF21O43680 179 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 ZFAND5O76080 213 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 CD99P14209 185 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 NPPCP23582 126 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 GNG10P50151 68 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 CCL7P80098 99 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 COL5A1-AS1Q5SY13 56 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 PRAMEF20Q5VT98 475 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 LINC01551Q86U37 167 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 MYPOPQ86VE0 399 aaPredicted RBP13.14□□□□□ -0.31
SSR4-206ENST00000460616 COL27A1Q8IZC6 1860 aaPredicted RBP13.14□□□□□ -0.31
SSR4-206ENST00000460616 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 Q8NFD4 153 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 TECTBQ96PL2 329 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
SSR4-206ENST00000460616 VAMP8Q9BV40 100 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms