RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-213ENST00000457179 OR10J1P30954 320 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 CCKARP32238 428 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 DEFB109BQ30KR1 87 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 CXorf66Q5JRM2 361 aaPredicted RBP11.6□□□□□ -0.55
TOP3B-213ENST00000457179 CRIP3Q6Q6R5 217 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 EXTL1Q92935 676 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 FBLN5Q9UBX5 448 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
TOP3B-213ENST00000457179 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 SYNGR4O95473 234 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 RAB7AP51149 207 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 ARF1P84077 181 aaKnown RBP11.59□□□□□ -0.55
TOP3B-213ENST00000457179 PSG4Q00888 419 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 SPTSSAQ969W0 71 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 ACY3Q96HD9 319 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 FER1L6-AS2Q96M78 137 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 ANXA10Q9UJ72 324 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 C21orf140B9A014 251 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 PROB1E7EW31 1015 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
TOP3B-213ENST00000457179 SPATA46Q5T0L3 261 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 OR8G5Q8NG78 346 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 PCSK5Q92824 1860 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 ABCA4P78363 2273 aa11.59□□□□□ -0.55
TOP3B-213ENST00000457179 C5orf49A4QMS7 147 aa11.58□□□□□ -0.55
TOP3B-213ENST00000457179 HSPB6O14558 160 aa11.58□□□□□ -0.55
TOP3B-213ENST00000457179 FKBP2P26885 142 aaKnown RBP11.58□□□□□ -0.55
TOP3B-213ENST00000457179 PIGYQ3MUY2 71 aa11.58□□□□□ -0.55
TOP3B-213ENST00000457179 COA6Q5JTJ3 125 aaKnown RBP11.58□□□□□ -0.55
TOP3B-213ENST00000457179 GNPNAT1Q96EK6 184 aaPredicted RBP11.58□□□□□ -0.55
TOP3B-213ENST00000457179 VSIRQ9H7M9 311 aa11.58□□□□□ -0.55
TOP3B-213ENST00000457179 PLEKHF2Q9H8W4 249 aa11.58□□□□□ -0.55
TOP3B-213ENST00000457179 KALRNO60229 2985 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
TOP3B-213ENST00000457179 SP1P08047 785 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 CHRNB4P30926 498 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 PLA2G5P39877 138 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 RBX1P62877 108 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 EIF3IQ13347 325 aaKnown RBP11.58□□□□□ -0.56
TOP3B-213ENST00000457179 CNEP1R1Q8N9A8 125 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 KCNE4Q8WWG9 221 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 C18orf12Q96KH6 178 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 SERPINE3A8MV23 424 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 HMGB3O15347 200 aaKnown RBP11.58□□□□□ -0.56
TOP3B-213ENST00000457179 NUPR1O60356 82 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 IL6RP08887 468 aaPredicted RBP11.58□□□□□ -0.56
TOP3B-213ENST00000457179 CD46P15529 392 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 S100A7P31151 101 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 GFRA1P56159 465 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 ZNF92Q03936 586 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 MSI2Q96DH6 328 aaKnown RBP11.58□□□□□ -0.56
TOP3B-213ENST00000457179 TUBG2Q9NRH3 451 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 TMEM38BQ9NVV0 291 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 PRSS50Q9UI38 385 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 GTF3C1Q12789 2109 aa11.58□□□□□ -0.56
TOP3B-213ENST00000457179 C20orf202A1L168 122 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 MSTNO14793 375 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 CYC1P08574 325 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 CCL1P22362 96 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 CNN1P51911 297 aaKnown RBP11.57□□□□□ -0.56
TOP3B-213ENST00000457179 PTTG1IPP53801 180 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 SOX8P57073 446 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 TESK1Q15569 626 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 ZNF766Q5HY98 468 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 OR51G1Q8NGK1 321 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 TMEM54Q969K7 222 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 CTDSP1Q9GZU7 261 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 RBKSQ9H477 322 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 INTS1Q8N201 2190 aaKnown RBP11.57□□□□□ -0.56
TOP3B-213ENST00000457179 ESPL1Q14674 2120 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 IGKV1-27A0A075B6S5 117 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 ECI1P42126 302 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 FAM3BP58499 235 aaPredicted RBP11.57□□□□□ -0.56
TOP3B-213ENST00000457179 KCNMB1Q16558 191 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 NUFIP2Q7Z417 695 aaKnown RBP11.57□□□□□ -0.56
TOP3B-213ENST00000457179 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 OR1F12Q8NHA8 337 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 BORCS8Q96FH0 119 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 GPR35Q9HC97 309 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 PTPRQQ9UMZ3 2332 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 DIDO1Q9BTC0 2240 aaKnown RBP11.57□□□□□ -0.56
TOP3B-213ENST00000457179 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
TOP3B-213ENST00000457179 KLRC4-KLRK1H3BQV0 150 aa11.56□□□□□ -0.56
TOP3B-213ENST00000457179 CEACAM8P31997 349 aaPredicted RBP11.56□□□□□ -0.56
TOP3B-213ENST00000457179 LHX2P50458 406 aa11.56□□□□□ -0.56
TOP3B-213ENST00000457179 FAM27BQ5VT28 67 aa11.56□□□□□ -0.56
TOP3B-213ENST00000457179 MYPOPQ86VE0 399 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms