RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ABHD1Q96SE0 405 aa11.35□□□□□ -0.59
SMPD4-215ENST00000457039 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
SMPD4-215ENST00000457039 ABCB10Q9NRK6 738 aa11.35□□□□□ -0.59
SMPD4-215ENST00000457039 IGHV1-3A0A0C4DH29 117 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 SULT1C2O00338 296 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 TIMM23O14925 209 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 LANCL1O43813 399 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 BRS3P32247 399 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 OR3A3P47888 321 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 REG1BP48304 166 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 ARHGDIBP52566 201 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 RPL15P61313 204 aaKnown RBP11.34□□□□□ -0.59
SMPD4-215ENST00000457039 FAM71F2Q6NXP2 309 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 MDFIQ99750 246 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 MMP27Q9H306 513 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 GHITMQ9H3K2 345 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 PIPOXQ9P0Z9 390 aa11.34□□□□□ -0.59
SMPD4-215ENST00000457039 DNHD1Q96M86 4753 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 A6NHS1 94 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 RAB29O14966 203 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 TXNL1O43396 289 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 CHST1O43916 411 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 PROP1O75360 226 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 CD24P25063 80 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 TNFSF8P32971 234 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 OR56B4Q8NH76 319 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 DIRAS2Q96HU8 199 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 SOSTQ9BQB4 213 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 GINS4Q9BRT9 223 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 C19orf24Q9BVV8 132 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 IFT46Q9NQC8 304 aa11.33□□□□□ -0.6
SMPD4-215ENST00000457039 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 TUSC2O75896 110 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 FCER2P06734 321 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 HKR1P10072 659 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 NFYAP23511 347 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-215ENST00000457039 ARPC4P59998 168 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 RELBQ01201 579 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 EBI3Q14213 229 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 LYSMD2Q8IV50 215 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 OR5AP2Q8NGF4 316 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 C15orf40Q8WUR7 153 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMPD4-215ENST00000457039 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 C1RLQ9NZP8 487 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 PITPNC1Q9UKF7 332 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
SMPD4-215ENST00000457039 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-215ENST00000457039 SNRNP70P08621 437 aaKnown RBP11.31□□□□□ -0.6
SMPD4-215ENST00000457039 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 CD1BP29016 333 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 LSAMPQ13449 338 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 CDK10Q15131 360 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 TMEM219Q86XT9 240 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 OR8U1Q8NH10 309 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 CAPSLQ8WWF8 208 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 C5orf30Q96GV9 206 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
SMPD4-215ENST00000457039 RAB18Q9NP72 206 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 NECAP2Q9NVZ3 263 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 RABL2AQ9UBK7 228 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-215ENST00000457039 RABL2BQ9UNT1 228 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 OR2W1Q9Y3N9 320 aa11.31□□□□□ -0.6
SMPD4-215ENST00000457039 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 CTDSPLO15194 276 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 NDUFA7O95182 113 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 IGKV1D-33P01593 117 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 IGKV1-33P01594 117 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 RCVRNP35243 200 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 MRPS10P82664 201 aaKnown RBP11.3□□□□□ -0.6
SMPD4-215ENST00000457039 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-215ENST00000457039 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-215ENST00000457039 OVCH2Q7RTZ1 564 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 Q8N6K4 173 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-215ENST00000457039 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
SMPD4-215ENST00000457039 S1PR3Q99500 378 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 OR2D2Q9H210 308 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 SDHAF2Q9NX18 166 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 KLK11Q9UBX7 282 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
SMPD4-215ENST00000457039 ZNF221Q9UK13 617 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms