RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 IGKV1D-39P04432 117 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 IAPPP10997 89 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 DUSP3P51452 185 aaPredicted RBP10.9□□□□□ -0.66
LINC00473-202ENST00000455853 GFRA1P56159 465 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 ZNF468Q5VIY5 522 aaPredicted RBP10.9□□□□□ -0.66
LINC00473-202ENST00000455853 KCNIP4Q6PIL6 250 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 HAPLN4Q86UW8 402 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 CISD2Q8N5K1 135 aaKnown RBP10.9□□□□□ -0.66
LINC00473-202ENST00000455853 TCTEX1D1Q8N7M0 179 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 IFI44Q8TCB0 444 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 TMEM18Q96B42 140 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 OR51I2Q9H344 312 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 VSIRQ9H7M9 311 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 GAB2Q9UQC2 676 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 TP53TG5Q9Y2B4 290 aa10.9□□□□□ -0.66
LINC00473-202ENST00000455853 ST8SIA5O15466 376 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
LINC00473-202ENST00000455853 TRAPPC6AO75865 159 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 AMBPP02760 352 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 CD99P14209 185 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 GDF1P27539 372 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
LINC00473-202ENST00000455853 RPL23P62829 140 aaKnown RBP10.89□□□□□ -0.67
LINC00473-202ENST00000455853 LCN2P80188 198 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 COL10A1Q03692 680 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 ARL16Q0P5N6 197 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 C4orf17Q53FE4 359 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 WIPI1Q5MNZ9 446 aaPredicted RBP10.89□□□□□ -0.67
LINC00473-202ENST00000455853 Q6ZRM9 215 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 RHOVQ96L33 236 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 CIB3Q96Q77 187 aaPredicted RBP10.89□□□□□ -0.67
LINC00473-202ENST00000455853 GPHA2Q96T91 129 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 NDUFAF3Q9BU61 184 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 PI4KAP42356 2102 aa10.89□□□□□ -0.67
LINC00473-202ENST00000455853 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 J3QW42 95 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SLC33A1O00400 549 aaPredicted RBP10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SYNGR1O43759 233 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SYNGR4O95473 234 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 CER1O95813 267 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SERPINA7P05543 415 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 GZMBP10144 247 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SPINK2P20155 84 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 COX5AP20674 150 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 FOXC1Q12948 553 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 HNF4GQ14541 408 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SSX7Q7RTT5 188 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 BATF2Q8N1L9 274 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 IMMP2LQ96T52 175 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 SSX3Q99909 188 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 MRPL37Q9BZE1 423 aaKnown RBP10.88□□□□□ -0.67
LINC00473-202ENST00000455853 CHODLQ9H9P2 273 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 HSPB7Q9UBY9 170 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 RBM7Q9Y580 266 aaKnown RBP10.88□□□□□ -0.67
LINC00473-202ENST00000455853 CNOT1A5YKK6 2376 aaKnown RBP10.88□□□□□ -0.67
LINC00473-202ENST00000455853 A8MWP6 167 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 C17orf112F2Z3M2 114 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 HSPB6O14558 160 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 CCNOP22674 350 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 TNFRSF9Q07011 255 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 TESK1Q15569 626 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 TMEM249Q2WGJ8 235 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 ACTL10Q5JWF8 245 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 CDCP2Q5VXM1 449 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 ABHD3Q8WU67 409 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 RDH5Q92781 318 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 NEIL1Q96FI4 390 aaPredicted RBP10.88□□□□□ -0.67
LINC00473-202ENST00000455853 MEGF10Q96KG7 1140 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 POM121L2Q96KW2 1035 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 IL36RNQ9UBH0 155 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 POLDIP2Q9Y2S7 368 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 WIPI2Q9Y4P8 454 aa10.88□□□□□ -0.67
LINC00473-202ENST00000455853 A0A0G2JMM0 328 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 UBE2L5PA0A1B0GUS4 154 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 A0A1W2PPB8 328 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 A0A1W2PRS3 328 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 KIR3DP1A8MWS1 328 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 NTN3O00634 580 aaPredicted RBP10.87□□□□□ -0.67
LINC00473-202ENST00000455853 HS3ST1O14792 307 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 ELLP55199 621 aaPredicted RBP10.87□□□□□ -0.67
LINC00473-202ENST00000455853 SSX2Q16385 188 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 Q6P435 159 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.87□□□□□ -0.67
LINC00473-202ENST00000455853 RPP25LQ8N5L8 163 aaKnown RBP10.87□□□□□ -0.67
LINC00473-202ENST00000455853 TXNDC17Q9BRA2 123 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 RTL8AQ9BWD3 113 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 PRO1933Q9H354 126 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 B4GALT7Q9UBV7 327 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
LINC00473-202ENST00000455853 CHD3Q12873 2000 aaKnown RBP10.87□□□□□ -0.67
LINC00473-202ENST00000455853 A0A1B0GV90 55 aa10.86□□□□□ -0.67
LINC00473-202ENST00000455853 IGLV2-14P01704 120 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms