RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 A0A1W2PRM7 423 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 LY6LH3BQJ8 138 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GABARAPH6UMI1 98 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 CTDSP2O14595 271 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 HSD17B6O14756 317 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 RGS13O14921 159 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 RAB29O14966 203 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 LANCL1O43813 399 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 SLC22A5O76082 557 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GAPDHP04406 335 aaKnown RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GSTT2P0CG29 244 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GSTT2BP0CG30 244 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 IGHV3-43DP0DP04 118 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 NAT1P18440 290 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 TBPP20226 339 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 RCVRNP35243 200 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 PPP1CCP36873 323 aaKnown RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 CEACAM6P40199 344 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 IER3P46695 156 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GNG10P50151 68 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 DLX1P56177 255 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ARPC4P59998 168 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 SSX2Q16385 188 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 PLA1AQ53H76 456 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ACTBL2Q562R1 376 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 LAX1Q8IWV1 398 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 IZUMO1Q8IYV9 350 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 OR52L2PQ8NGH6 319 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 OR10V1Q8NGI7 309 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 FCAMRQ8WWV6 532 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 C22orf15Q8WYQ4 148 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 BORCS5Q969J3 196 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 TOMM40LQ969M1 308 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 AJUBAQ96IF1 538 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF48Q96MX3 618 aaPredicted RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 S1PR3Q99500 378 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GINS4Q9BRT9 223 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 MIXL1Q9H2W2 232 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 NECAP2Q9NVZ3 263 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF230Q9UIE0 474 aaPredicted RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 VPREB3Q9UKI3 123 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 GAB2Q9UQC2 676 aa7.04□□□□□ -1.28
COL28A1-205ENST00000453441 MRPS7Q9Y2R9 242 aaKnown RBP7.04□□□□□ -1.28
COL28A1-205ENST00000453441 ATRQ13535 2644 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 FAM172BPA6NC97 362 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 FABP12A6NFH5 140 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 DNAJC9-AS1A6NH13 148 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 BET1O15155 118 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 RBBP9O75884 186 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 TNFSF8P32971 234 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 OR3A3P47888 321 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 PRB3Q04118 309 aaPredicted RBP7.03□□□□□ -1.28
COL28A1-205ENST00000453441 IL18Q14116 193 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 GNMTQ14749 295 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 HERPUD1Q15011 391 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 MSMO1Q15800 293 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 CT45A1Q5HYN5 189 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 LHFPL4Q7Z7J7 247 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 THNSL2Q86YJ6 484 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 TGIF2LXQ8IUE1 241 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 SNX29P2Q8IUI4 249 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 H1FOOQ8IZA3 346 aaPredicted RBP7.03□□□□□ -1.28
COL28A1-205ENST00000453441 LYG1Q8N1E2 194 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 OR5AP2Q8NGF4 316 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 CT45A3Q8NHU0 189 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 UBALD1Q8TB05 177 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 LEAP2Q969E1 77 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 ST6GALNAC6Q969X2 333 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 IFI27L2Q9H2X8 130 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 RDH8Q9NYR8 311 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 TAS2R8Q9NYW2 309 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 ZNF221Q9UK13 617 aa7.03□□□□□ -1.28
COL28A1-205ENST00000453441 ELF5Q9UKW6 265 aaPredicted RBP7.03□□□□□ -1.28
COL28A1-205ENST00000453441 IGKV1-6A0A0C4DH72 117 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 H3BUX3 64 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 HOXA3O43365 443 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 GSTZ1O43708 216 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 FAM106CPP0CH98 169 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 ETV6P41212 452 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF134P52741 427 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 UBA52P62987 128 aaKnown RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 HABP2Q14520 560 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 CDK10Q15131 360 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 IGSF11Q5DX21 431 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 FOXB2Q5VYV0 432 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 ZNF833PQ6ZTB9 187 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 ZDHHC22Q8N966 263 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 OR5H2Q8NGV7 314 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 SMIM4Q8WVI0 70 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 RTN4IP1Q8WWV3 396 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 DEDD2Q8WXF8 326 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 MAFIPQ8WZ33 124 aa7.02□□□□□ -1.29
COL28A1-205ENST00000453441 GCDHQ92947 438 aaPredicted RBP7.02□□□□□ -1.29
COL28A1-205ENST00000453441 CYYR1Q96J86 154 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms