RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 KIAA1456Q9P272 454 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
CHD3-206ENST00000452447 SORL1Q92673 2214 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 A0A0A6YYD4 124 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 K7EIL1 84 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 NBR2O15453 112 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 HSPA12AO43301 675 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 IGHG4P01861 327 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 PSMD7P51665 324 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 EGFEM1PQ0D2K5 195 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 LIN54Q6MZP7 749 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 FAM71F2Q6NXP2 309 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 ZNF880Q6PDB4 577 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 TMEM65Q6PI78 240 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 RNF152Q8N8N0 203 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 RAX2Q96IS3 184 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 KCTD7Q96MP8 289 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 IFI27L2Q9H2X8 130 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 GHITMQ9H3K2 345 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 ACOT13Q9NPJ3 140 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
CHD3-206ENST00000452447 SLC23A1Q9UHI7 598 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 AK3Q9UIJ7 227 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 ZNF580Q9UK33 172 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 HSF4Q9ULV5 492 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 MGAT4AQ9UM21 535 aa10.1□□□□□ -0.79
CHD3-206ENST00000452447 TRBV6-6A0A0A6YYG2 114 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 ZBTB25P24278 435 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 CNTFRP26992 372 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 MAP2K4P45985 399 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 VEGFCP49767 419 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 CFHR3Q02985 330 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 C5orf64Q2M2E5 130 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 FAM89BQ8N5H3 189 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 EDARADDQ8WWZ3 215 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 FAM3DQ96BQ1 224 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 RITA1Q96K30 269 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 GFI1Q99684 422 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 HDHD3Q9BSH5 251 aaPredicted RBP10.09□□□□□ -0.79
CHD3-206ENST00000452447 C12orf4Q9NQ89 552 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 PARP11Q9NR21 331 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 V9GY05 133 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 HLA-DRB1P01911 266 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 PSMB8P28062 276 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 CEACAM6P40199 344 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 CLDN12P56749 244 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 HLA-DRB3P79483 266 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 FABP5Q01469 135 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 RPL39P5Q59GN2 51 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 NPBQ8NG41 125 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 OR56B1Q8NGI3 324 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 OR5M8Q8NGP6 311 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 ARHGAP5-AS1Q96IT6 56 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 OR51J1Q9H342 316 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 WSB1Q9Y6I7 421 aa10.09□□□□□ -0.79
CHD3-206ENST00000452447 A0A087WXM4 84 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 OR5H14A6NHG9 310 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 H7C2Y5 167 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 ITGB1BP1O14713 200 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 ATP6V0E1O15342 81 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 GSTP1P09211 210 aaKnown RBP10.08□□□□□ -0.8
CHD3-206ENST00000452447 MC5RP33032 325 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 MRPS15P82914 257 aaKnown RBP10.08□□□□□ -0.8
CHD3-206ENST00000452447 PLGLAQ15195 96 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 C2orf76Q3KRA6 126 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 FAM131AQ6UXB0 335 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 C4orf3Q8WVX3 66 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 ABHD14BQ96IU4 210 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 CMSS1Q9BQ75 279 aaKnown RBP10.08□□□□□ -0.8
CHD3-206ENST00000452447 Q9N2K0 584 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 SCOCQ9UIL1 159 aa10.08□□□□□ -0.8
CHD3-206ENST00000452447 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 FOXI3A8MTJ6 420 aaPredicted RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 G3V318 75 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 NDUFA3O95167 84 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 SCTP09683 121 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 CT45A6P0DMU7 189 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 CT45A5P0DMU8 189 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 CT45A7P0DMV0 189 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 PPIFP30405 207 aaKnown RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 TMEM50BP56557 158 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 TBCEQ15813 527 aaPredicted RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 GLDNQ6ZMI3 551 aaPredicted RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 ZNF367Q7RTV3 350 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 AGMATQ9BSE5 352 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 PECRQ9BY49 303 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 PARP12Q9H0J9 701 aaKnown RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 C11orf54Q9H0W9 315 aaPredicted RBP10.07□□□□□ -0.8
CHD3-206ENST00000452447 OR1A1Q9P1Q5 309 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
CHD3-206ENST00000452447 PDCD5O14737 125 aa10.06□□□□□ -0.8
CHD3-206ENST00000452447 DGCR2P98153 550 aa10.06□□□□□ -0.8
CHD3-206ENST00000452447 DCTN2Q13561 401 aaKnown RBP10.06□□□□□ -0.8
CHD3-206ENST00000452447 HES5Q5TA89 166 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms