RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TNFSF13O75888 250 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SMIM6P0DI80 62 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MPV17LQ2QL34 196 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM155Q4W5P6 130 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DNM1P46Q6ZS02 220 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 DUSP18Q8NEJ0 188 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR56B4Q8NH76 319 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 LINC00527Q9UJ94 153 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 HELTA6NFD8 242 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 CLEC2LP0C7M8 214 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SCGB1C2P0DMR2 95 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 HLA-DMAP28067 261 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 MMP16P51512 607 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 UBE2G2P60604 165 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF154Q13106 437 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM30BQ3MIR4 351 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 BCDIN3DQ7Z5W3 292 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 SVBPQ8N300 66 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 CXorf58Q96LI9 332 aa4.76□□□□□ -1.65
CDC42BPA-209ENST00000448940 PCDH15Q96QU1 1955 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 DUS4LO95620 317 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHV1-46P01743 117 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ACSM4P0C7M7 580 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ELK1P19419 428 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 TAS2R31P59538 309 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 RUSC1-AS1Q66K80 236 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ARHGAP21Q5T5U3 1957 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF729A6NN14 1252 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 RPL36A-HNRNPH2H7BZ11 118 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FABP7O15540 132 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 LANCL1O43813 399 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGF2P01344 180 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CT45A10P0DMU9 189 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CAV2P51636 162 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF137PP52743 207 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ATP5IP56385 69 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CLDN12P56749 244 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 POU2AF1Q16633 256 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FBXL19-AS1Q494R0 122 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 LHFPL4Q7Z7J7 247 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 RTN4RL2Q86UN3 420 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRSS35Q8N3Z0 413 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 BEST4Q8NFU0 473 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 A0A1B0GV72 72 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ODAMA1E959 279 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 PGPA6NDG6 321 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 MLLT11Q13015 90 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 WDR25Q64LD2 544 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM216BQ8N7L0 139 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 PLXNA2O75051 1894 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 A0A1W2PPE3 182 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FHITP49789 147 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM177Q53S58 311 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 ARHGEF39Q8N4T4 335 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR1L6Q8NGR2 347 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR4S2Q8NH73 311 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 THAP6Q8TBB0 222 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 MALSU1Q96EH3 234 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 PLA2G12AQ9BZM1 189 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FBXO7Q9Y3I1 522 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 KPTNQ9Y664 436 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 NXPH3O95157 252 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 HABP2Q14520 560 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 MAP6Q96JE9 813 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 HYLS1Q96M11 299 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 EIF5A2Q9GZV4 153 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 A0A0U1RQV5 110 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CRLF1O75462 422 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 KIR2DS2P43631 304 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CDK5R1Q15078 307 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM201AQ5SY85 155 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 TPRX1Q8N7U7 411 aa4.75□□□□□ -1.65
CDC42BPA-209ENST00000448940 CLPSL1A2RUU4 121 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR4C46A6NHA9 309 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHMP01871 453 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ACKR3P25106 362 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 MEF2CQ06413 473 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SEH1LQ96EE3 360 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CHST5Q9GZS9 411 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 TLNRD1Q9H1K6 362 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 KANTRA0A1W2PQU2 76 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 F5H0A9 414 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SRMP19623 302 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 CD24P25063 80 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ACSM1Q08AH1 577 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 POC1AQ8NBT0 407 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF436Q9C0F3 470 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 AP5S1Q9NUS5 200 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 SOD3P08294 240 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 POLR2IP36954 125 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 IL13RA2Q14627 380 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR5B3Q8NH48 314 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms