RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 NSDHLQ15738 373 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 C1orf194Q5T5A4 169 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 ZFAND6Q6FIF0 208 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 FA2HQ7L5A8 372 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 ATP5L2Q7Z4Y8 100 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 VN1R4Q7Z5H5 301 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 MDP1Q86V88 176 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 ANKRD29Q8N6D5 301 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 GDPD1Q8N9F7 314 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 OR2T4Q8NH00 348 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 ZNF675Q8TD23 568 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 TMEM203Q969S6 136 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 SLC25A44Q96H78 314 aaPredicted RBP3.34□□□□□ -1.87
VPS50-206ENST00000443443 SMIM14Q96QK8 99 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 TCEAL7Q9BRU2 100 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 Q9H3A6 140 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 MMP26Q9NRE1 261 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 MED29Q9NX70 200 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 NEU3Q9UQ49 428 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 FIS1Q9Y3D6 152 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 RTL1A6NKG5 1358 aa3.34□□□□□ -1.88
VPS50-206ENST00000443443 TONSLQ96HA7 1378 aa3.34□□□□□ -1.88
VPS50-206ENST00000443443 MTCL1Q9Y4B5 1905 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 BORCS7-ASMTA0A0B4J1R7 106 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 IGHV6-1A0A0B4J1U7 121 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 TRAV26-2A0A0B4J265 109 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 KNCNA6PVL3 124 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 F5H5P2 479 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 M0R1X1 148 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 PEX7O00628 323 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 CYB5BO43169 146 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 DLEU1O43261 78 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 SS18L1O75177 396 aaPredicted RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 KBTBD11O94819 623 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 LY6G6DO95868 133 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 IGHG2P01859 326 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 C1QBP02746 253 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 OR4Q2P0C623 313 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 CHTF8P0CG12 524 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 SCGB1C2P0DMR2 95 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 MP68P56378 58 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 PIGPP57054 158 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 SNRPD2P62316 118 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 RPL23P62829 140 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 GRB2P62993 217 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 CDK5Q00535 292 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 MPPED2Q15777 294 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 PLPPR5Q32ZL2 321 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 CLEC20AQ6ZU45 233 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 MOB1BQ7L9L4 216 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 HSD17B13Q7Z5P4 300 aaPredicted RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 LRRC28Q86X40 367 aaPredicted RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 UMODL1-AS1Q8N2C9 162 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 C11orf42Q8N5U0 333 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 OR8B12Q8NGG6 310 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 OR51H1Q8NH63 302 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 SCGB1C1Q8TD33 95 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 GPR146Q96CH1 333 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 RBM12B-AS1Q9P1G2 102 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 LINC00527Q9UJ94 153 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 DHX57Q6P158 1386 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 NPATQ14207 1427 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 MIA2Q96PC5 1412 aa3.33□□□□□ -1.88
VPS50-206ENST00000443443 BRCA1P38398 1863 aaKnown RBP3.33□□□□□ -1.88
VPS50-206ENST00000443443 TRAV19A0A0A6YYK7 116 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 IGKV1-8A0A0C4DH67 115 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 A0A0G2JN53 185 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 INMT-MINDY4F8WBC2 141 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 UPK1AO00322 258 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 SLC37A4O43826 429 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 COX7A2P2O60397 106 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 IGHMP01871 453 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 BGLAPP02818 100 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 DBIP07108 87 aaKnown RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 RBP1P09455 135 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 FBP1P09467 338 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 MDH2P40926 338 aaKnown RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 DNAJB13P59910 316 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 MEF2CQ06413 473 aaPredicted RBP3.32□□□□□ -1.88
VPS50-206ENST00000443443 ERCC8Q13216 396 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 KCNJ8Q15842 424 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 GUCA2BQ16661 112 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 CLLU1OSQ5K130 101 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 DNAJC24Q6P3W2 148 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 Q6ZRU5 148 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 RFLNAQ6ZTI6 216 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 TCF24Q7RTU0 167 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 FAM151AQ8WW52 585 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 MALSU1Q96EH3 234 aa3.32□□□□□ -1.88
VPS50-206ENST00000443443 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms