RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ABCA12Q86UK0 2595 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-205ENST00000439958 HNF4GQ14541 408 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 SPINK9Q5DT21 86 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF767PQ75MW2 155 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
CPSF7-205ENST00000439958 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 RGS13O14921 159 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 ST8SIA3O43173 380 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-205ENST00000439958 SRPXP78539 464 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
CPSF7-205ENST00000439958 HEXA-AS1Q9H8Q6 139 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 RCL1Q9Y2P8 373 aaKnown RBP12.51□□□□□ -0.41
CPSF7-205ENST00000439958 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
CPSF7-205ENST00000439958 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 G6PCP35575 357 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 LPAR6P43657 344 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 CLINT1Q14677 625 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 LRRC10Q5BKY1 277 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 C19orf12Q9NSK7 152 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 LIN7CQ9NUP9 197 aaKnown RBP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 A0A0D9SG52 128 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 FCGR3BO75015 233 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 FBXO24O75426 580 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 HLA-GP17693 338 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 CFHR2P36980 270 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 RPS16P62249 146 aaKnown RBP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 TRAF4Q9BUZ4 470 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 USP9YO00507 2555 aaPredicted RBP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 SOD3P08294 240 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 IAPPP10997 89 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 RPL12P30050 165 aaKnown RBP12.5□□□□□ -0.41
CPSF7-205ENST00000439958 ERGIC1Q969X5 290 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 PTPN13Q12923 2485 aa12.5□□□□□ -0.41
CPSF7-205ENST00000439958 DVL1O14640 695 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 SLC31A2O15432 143 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 MMP23AO75900 390 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 REG1BP48304 166 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 RPL30P62888 115 aaKnown RBP12.49□□□□□ -0.41
CPSF7-205ENST00000439958 CATR1Q13166 79 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF273Q14593 569 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 MST1LQ2TV78 715 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 BVESQ8NE79 360 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 LILRB1Q8NHL6 650 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-205ENST00000439958 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 LURAP1Q96LR2 239 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 H0Y980 276 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 CST7O76096 145 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 OR2F2O95006 317 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 OR2F1Q13607 317 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF788Q6ZQV5 615 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 ZNF645Q8N7E2 425 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 A0A0G2JRQ6 117 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 NDUFS7O75251 213 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 VDAC1P21796 283 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 FBXL19-AS1Q494R0 122 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 VKORC1L1Q8N0U8 176 aa12.49□□□□□ -0.41
CPSF7-205ENST00000439958 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-205ENST00000439958 hADV38S2A0JD32 116 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 SLC51BQ86UW2 128 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 ASB13Q8WXK3 278 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 ST8SIA2Q92186 375 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 SDHAF2Q9NX18 166 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 ABCA1O95477 2261 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 CDS2O95674 445 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 TMED6Q8WW62 240 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 S1PR2O95136 353 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 ADH4P08319 380 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-205ENST00000439958 UCP1P25874 307 aa12.48□□□□□ -0.41
CPSF7-205ENST00000439958 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.416e-8■■■■□ 22.6
CPSF7-205ENST00000439958 A0A1B0GWJ7 208 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 A1L4Q6 167 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 FAM24AA6NFZ4 105 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 BCL2L11O43521 198 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 SLC25A4P12235 298 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 MORN2Q502X0 79 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 PDZD9Q8IXQ8 264 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 KCNRGQ8N5I3 272 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
CPSF7-205ENST00000439958 KBTBD11-OT1A0A1B0GTJ5 212 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms