RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 ZBTB25P24278 435 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 BTCP35070 178 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 ECI1P42126 302 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 TMEM200BQ69YZ2 307 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 PLET1Q6UQ28 207 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 IDO2Q6ZQW0 420 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 OR6F1Q8NGZ6 308 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 RFESDQ8TAC1 157 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
PTPRF-208ENST00000437607 OR2S2Q9NQN1 319 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 OR1A1Q9P1Q5 309 aa9.89□□□□□ -0.83
PTPRF-208ENST00000437607 TRBV6-7A0A0A0MS04 114 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 IGHV3-43A0A0B4J1X8 118 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 A0A1B0GUS0 222 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 F2RL2O00254 374 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NDUFA7O95182 113 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 RBP4P02753 201 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 ZNF735P0CB33 412 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 IGHV3-43DP0DP04 118 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 MMP9P14780 707 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 PGAM2P15259 253 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NFYAP23511 347 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NFYBP25208 207 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 SLC6A1P30531 599 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 FCGR2CP31995 323 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 CCR6P51684 374 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 FXYD4P59646 89 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 HTD2P86397 168 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 GNMTQ14749 295 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 C17orf58Q2M2W7 97 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NRARPQ7Z6K4 114 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 H1FOOQ8IZA3 346 aaPredicted RBP9.88□□□□□ -0.83
PTPRF-208ENST00000437607 OR10A7Q8NGE5 316 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 OR10V1Q8NGI7 309 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 OR4F5Q8NH21 305 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 TOMM40LQ969M1 308 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 FXYD6Q9H0Q3 95 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 C20orf85Q9H1P6 137 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 BEX1Q9HBH7 125 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NUDT15Q9NV35 164 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 RBM7Q9Y580 266 aaKnown RBP9.88□□□□□ -0.83
PTPRF-208ENST00000437607 NUBP2Q9Y5Y2 271 aa9.88□□□□□ -0.83
PTPRF-208ENST00000437607 CENPVL3A0A0U1RRI6 287 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 M0R1W7 72 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 PPYP01298 95 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 AADACP22760 399 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 PPP1CCP36873 323 aaKnown RBP9.87□□□□□ -0.83
PTPRF-208ENST00000437607 GPR157Q5UAW9 335 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 HEPN1Q6WQI6 88 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 C5orf24Q7Z6I8 188 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 OR52L2PQ8NGH6 319 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 CHPT1Q8WUD6 406 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 EDARADDQ8WWZ3 215 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 MOB3AQ96BX8 217 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 SCGB3A2Q96PL1 93 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
PTPRF-208ENST00000437607 PCGF1Q9BSM1 259 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 GFOD1Q9NXC2 390 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 RDH8Q9NYR8 311 aa9.87□□□□□ -0.83
PTPRF-208ENST00000437607 TUSC2O75896 110 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 NDUFB6O95139 128 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 TCRBP04435 133 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 CGB3P0DN86 165 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 CGB7P0DN87 165 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 CEACAM6P40199 344 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 LUMP51884 338 aaPredicted RBP9.86□□□□□ -0.83
PTPRF-208ENST00000437607 BPIFB3P59826 476 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 ERVFRD-1P60508 538 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 OXA1LQ15070 435 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 SURF2Q15527 256 aaPredicted RBP9.86□□□□□ -0.83
PTPRF-208ENST00000437607 PLA1AQ53H76 456 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 METTL11BQ5VVY1 283 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 LHFPL1Q86WI0 220 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 OR2AK2Q8NG84 335 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 TERB2Q8NHR7 220 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 CREB3L1Q96BA8 519 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 DMRTB1Q96MA1 342 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 C14orf166Q9Y224 244 aaKnown RBP9.86□□□□□ -0.83
PTPRF-208ENST00000437607 OR2W1Q9Y3N9 320 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 SESN1Q9Y6P5 492 aa9.86□□□□□ -0.83
PTPRF-208ENST00000437607 OR5H14A6NHG9 310 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 C17orf98A8MV24 154 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 ARPC1BO15143 372 aaKnown RBP9.85□□□□□ -0.83
PTPRF-208ENST00000437607 YPEL1O60688 119 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 RLN1P04808 185 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 CRYBA1P05813 215 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 IGHV1-8P0DP01 117 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 S100GP29377 79 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms