RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ASCL3Q9NQ33 180 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 ARID1AO14497 2285 aa8.76□□□□□ -1.01
CD44-210ENST00000434472 DNAJC13O75165 2243 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 CXorf65A6NEN9 183 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 WNT9BO14905 357 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 SPINT2O43291 252 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 CLDN14O95500 239 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 S100A8P05109 93 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 ADH4P08319 380 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 P0C879 139 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 TAGLN2P37802 199 aaKnown RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 GABRA2P47869 451 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 CEBPDP49716 269 aaPredicted RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 HTD2P86397 168 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 COL10A1Q03692 680 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 AESQ08117 197 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 EIF2S3LQ2VIR3 472 aaKnown RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 SPANXN5Q5MJ07 72 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 ZNF787Q6DD87 383 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 BEND4Q6ZU67 534 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 BHLHA15Q7RTS1 189 aaPredicted RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 CXorf67Q86X51 503 aaPredicted RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 DEFB124Q8NES8 71 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 OR52L2PQ8NGH6 319 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 PPP1R35Q8TAP8 253 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 UBALD1Q8TB05 177 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 TCTEX1D2Q8WW35 142 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 RAB39BQ96DA2 213 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 COQ2Q96H96 371 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 HSD17B10Q99714 261 aaKnown RBP8.75□□□□□ -1.01
CD44-210ENST00000434472 TCEAL7Q9BRU2 100 aa8.75□□□□□ -1.01
CD44-210ENST00000434472 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 A0A1W2PPE2 198 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 C5orf52A6NGY3 159 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 LRRC30A6NM36 301 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 UBE2CO00762 179 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 NDUFS6O75380 124 aaKnown RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 CLDN1O95832 211 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 MBP02144 154 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 BCL2P10415 239 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 DAOP14920 347 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 RPS23P62266 143 aaKnown RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 ARL16Q0P5N6 197 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 PNRC1Q12796 327 aaPredicted RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 PRAMEF6Q5VXH4 476 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 RBMS3Q6XE24 437 aaKnown RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 Q6ZR03 302 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 ZNF826PQ6ZT77 177 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 CENPVQ7Z7K6 275 aaPredicted RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 HAPLN4Q86UW8 402 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 ZADH2Q8N4Q0 377 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 FAM24BQ8N5W8 94 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 EDARADDQ8WWZ3 215 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 TAF15Q92804 592 aaKnown RBP eCLIP8.74□□□□□ -1.01
CD44-210ENST00000434472 ISOC2Q96AB3 205 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 OR4C12Q96R67 309 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 TMEM147Q9BVK8 224 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 MRPL37Q9BZE1 423 aaKnown RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 ZNF71Q9NQZ8 489 aaPredicted RBP8.74□□□□□ -1.01
CD44-210ENST00000434472 RPRMQ9NS64 109 aa8.74□□□□□ -1.01
CD44-210ENST00000434472 IGHV1-18A0A0C4DH31 117 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 IGHV3-64DA0A0J9YX35 117 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 OR5H1A6NKK0 313 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 CEACAM4O75871 244 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 ARG1P05089 322 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
CD44-210ENST00000434472 GZMHP20718 246 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 MEOX2P50222 304 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 FABP6P51161 128 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 SNRPEP62304 92 aaKnown RBP8.73□□□□□ -1.01
CD44-210ENST00000434472 DLK1P80370 383 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 S100A12P80511 92 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 C3orf36Q3SXR2 165 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 H2BFWTQ7Z2G1 175 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 CYB561D1Q8N8Q1 229 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 ZNF610Q8N9Z0 462 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 MRGPRDQ8TDS7 321 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 MUCL1Q96DR8 90 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 YPEL4Q96NS1 127 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 C12orf57Q99622 126 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 RAB9BQ9NP90 201 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 GNG13Q9P2W3 67 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 METTL1Q9UBP6 276 aaKnown RBP8.73□□□□□ -1.01
CD44-210ENST00000434472 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
CD44-210ENST00000434472 SPAARA0A1B0GVQ0 90 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 ODAMA1E959 279 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 MBD3L4A6NDZ8 208 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 MBD3L5A6NJ08 208 aaPredicted RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 FAM90A9PA6NNJ1 464 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 S1PR2O95136 353 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 PTBP3O95758 552 aaKnown RBP8.72□□□□□ -1.01
CD44-210ENST00000434472 KRASP01116 189 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 CGAP01215 116 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 PRDX2P32119 198 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 G6PCP35575 357 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 CFHR2P36980 270 aa8.72□□□□□ -1.01
CD44-210ENST00000434472 CEBPGP53567 150 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms