RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 IL37Q9NZH6 218 aa1.45□□□□□ -2.18
PTPN4-205ENST00000433888 WASHC3Q9Y3C0 194 aa1.45□□□□□ -2.18
PTPN4-205ENST00000433888 NOS1P29475 1434 aa1.45□□□□□ -2.18
PTPN4-205ENST00000433888 RIMS2Q9UQ26 1411 aa1.45□□□□□ -2.18
PTPN4-205ENST00000433888 PLCH2O75038 1416 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 IGKV1D-37A0A075B6S9 117 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 IGSF23A1L1A6 192 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LEUTXA8MZ59 168 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 H3BQ85 93 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LECT2O14960 151 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 PDYNP01213 254 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 APOEP02649 317 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 CRYGDP07320 174 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 CCR7P32248 378 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 HSPA9P38646 679 aaKnown RBP1.44□□□□□ -2.18
PTPN4-205ENST00000433888 INPP1P49441 399 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 DAD1P61803 113 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 AESQ08117 197 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 BAMBIQ13145 260 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 PRDX4Q13162 271 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 CLVS2Q5SYC1 327 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 OGFRL1Q5TC84 451 aaPredicted RBP1.44□□□□□ -2.18
PTPN4-205ENST00000433888 HIST2H3PS2Q5TEC6 136 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 NOXRED1Q6NXP6 359 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LRRN1Q6UXK5 716 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 SCGB1D4Q6XE38 83 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 HIST2H3AQ71DI3 136 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LYPD6Q86Y78 171 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LINC00304Q8N9R0 145 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 CCDC112Q8NEF3 446 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 LMX1AQ8TE12 382 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 DTD1Q8TEA8 209 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 TMBIM1Q969X1 311 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 TLCD1Q96CP7 247 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 IGF2BP2-AS1Q96M15 143 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 MED28Q9H204 178 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 OR51V1Q9H2C8 321 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 UCK1Q9HA47 277 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 SPANXB1Q9NS25 103 aaPredicted RBP1.44□□□□□ -2.18
PTPN4-205ENST00000433888 TAS2R9Q9NYW1 312 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 RPUSD1Q9UJJ7 312 aaKnown RBP1.44□□□□□ -2.18
PTPN4-205ENST00000433888 PKIGQ9Y2B9 76 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 R4GN34 69 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 ZNF638Q14966 1978 aaKnown RBP1.44□□□□□ -2.18
PTPN4-205ENST00000433888 MYO5BQ9ULV0 1848 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 NID2Q14112 1375 aa1.44□□□□□ -2.18
PTPN4-205ENST00000433888 NAV1Q8NEY1 1877 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 LCTP09848 1927 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 MDFIC2A0A1B0GVS7 189 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TRAPPC3O43617 180 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 SLC25A20O43772 301 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 SH2D1AO60880 128 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 DEDDO75618 318 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 STK16O75716 305 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 FSTL3O95633 263 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 IL3P08700 152 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 C8orf88P0DMB2 117 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 PTHLHP12272 177 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 OR1E2P47887 323 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 AP2S1P53680 142 aaPredicted RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 C1QTNF8P60827 252 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 HLA-DRB3P79483 266 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 BASP1P80723 227 aaKnown RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 MRPS15P82914 257 aaKnown RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TMEM176BQ3YBM2 270 aaPredicted RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 FAM229BQ4G0N7 80 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 C10orf91Q5T1B1 145 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 LPCAT4Q643R3 524 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 CD200R1LQ6Q8B3 271 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 SPINT4Q6UDR6 99 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 SLC51BQ86UW2 128 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 BAP18Q8IXM2 172 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 NATD1Q8N6N6 113 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 APCDD1LQ8NCL9 501 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 ZNF680Q8NEM1 530 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 HIST1H2BAQ96A08 127 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 CMBLQ96DG6 245 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 C8orf76Q96K31 380 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 PECRQ9BY49 303 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TSGA10Q9BZW7 698 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TRIM45Q9H8W5 580 aaPredicted RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 HRASLSQ9HDD0 168 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 CMTM6Q9NX76 183 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TAS2R1Q9NYW7 299 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 MRPS16Q9Y3D3 137 aaKnown RBP1.43□□□□□ -2.18
PTPN4-205ENST00000433888 LINC00588Q9Y4M8 146 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 TRAPPC1Q9Y5R8 145 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 A0A1W2PP64 1363 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 CHD5Q8TDI0 1954 aa1.43□□□□□ -2.18
PTPN4-205ENST00000433888 LTBP4Q8N2S1 1624 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 IGKV3D-11A0A0A0MRZ8 115 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 GMNCA6NCL1 334 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 OR6C70A6NIJ9 312 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 COPEO14579 308 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 SOD1P00441 154 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ISG15P05161 165 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 HLA-DQB2P05538 268 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ZNF22P17026 224 aaPredicted RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 CRABP1P29762 137 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 SERPINB10P48595 397 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms