RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CENPEQ02224 2701 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 TMEM30CPA0ZSE6 113 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 WRBO00258 174 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 TXNL1O43396 289 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR2H2O95918 312 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 SERPINE2P07093 398 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CELA3BP08861 270 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 SFTA3P0C7M3 94 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR8U9P0C7N5 309 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CCL2P13500 99 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF44P15621 663 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CA6P23280 308 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 HOXC12P31275 282 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 MAS1LP35410 378 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CAMLGP49069 296 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 SULT1A1P50225 295 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 RHEBQ15382 184 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 GUK1Q16774 197 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR2T2Q6IF00 324 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 IGFL3Q6UXB1 125 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 MEX3BQ6ZN04 569 aaKnown RBP6.26□□□□□ -1.41
COL17A1-204ENST00000433822 WDR86Q86TI4 376 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 STX12Q86Y82 276 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 C15orf54Q8N8G6 183 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR1J1Q8NGS3 322 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR10Z1Q8NGY1 313 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 OR8U1Q8NH10 309 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 RBMXL1Q96E39 390 aaKnown RBP6.26□□□□□ -1.41
COL17A1-204ENST00000433822 DEFB127Q9H1M4 99 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CXXC4Q9H2H0 198 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 FBN2P35556 2912 aa6.26□□□□□ -1.41
COL17A1-204ENST00000433822 CACNA1DQ01668 2161 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 POLQO75417 2590 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 TLN1Q9Y490 2541 aaKnown RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 MBD3L4A6NDZ8 208 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 MBD3L3A6NE82 208 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 OOEPA6NGQ2 149 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 MBD3L5A6NJ08 208 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 PPIHO43447 177 aaKnown RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 SOX15O60248 233 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 NXPH2O95156 264 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 ATP6V0CP27449 155 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 CD80P33681 288 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 KIR2DL2P43627 348 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 PAX9P55771 341 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 RAB2AP61019 212 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 SERF2P84101 59 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 SRSF3P84103 164 aaKnown RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 NHLH2Q02577 135 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 TLE4Q04727 773 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 PDCD1Q15116 288 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 TESK1Q15569 626 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 IGFBP7Q16270 282 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 CR1LQ2VPA4 569 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 ZNF645Q8N7E2 425 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 WDR31Q8NA23 367 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 MBD3L2Q8NHZ7 208 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 SLC25A40Q8TBP6 338 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 RDH5Q92781 318 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 GPR146Q96CH1 333 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 LURAP1Q96LR2 239 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 OR2J1Q9GZK6 312 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 C12orf49Q9H741 205 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 IL36RNQ9UBH0 155 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 ERRFI1Q9UJM3 462 aaPredicted RBP6.25□□□□□ -1.41
COL17A1-204ENST00000433822 ESPL1Q14674 2120 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 DOCK7Q96N67 2140 aa6.25□□□□□ -1.41
COL17A1-204ENST00000433822 ICE1Q9Y2F5 2266 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 FAM24AA6NFZ4 105 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 FAM90A9PA6NNJ1 464 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ATP6V1G2-DDX39BF2Z307 99 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ITGB1BP1O14713 200 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HSD17B6O14756 317 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 SYNGR2O43760 224 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 SSSCA1O60232 199 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 RHBDL1O75783 438 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TSPAN9O75954 239 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HAND1O96004 215 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 IGLV2-14P01704 120 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 PRH1P02810 166 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HSPB1P04792 205 aaKnown RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 ADH4P08319 380 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 FTH1P19P0C7X4 201 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 P0C879 139 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 TAGLN2P37802 199 aaKnown RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 NPBWR1P48145 328 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 IDH3GP51553 393 aaPredicted RBP6.24□□□□□ -1.41
COL17A1-204ENST00000433822 AKR1C2P52895 323 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HBG1P69891 147 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HBG2P69892 147 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 HTD2P86397 168 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 AKR1C1Q04828 323 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 PSG7Q13046 419 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 CATR1Q13166 79 aa6.24□□□□□ -1.41
COL17A1-204ENST00000433822 EIF4EBP1Q13541 118 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms