RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CLN3Q13286 438 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 IGF2-ASQ6U949 168 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 FAM58AQ8N1B3 248 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 CIB3Q96Q77 187 aaPredicted RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 RSG1Q9BU20 258 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 TMEM147Q9BVK8 224 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 MTCH1Q9NZJ7 389 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 LAMP3Q9UQV4 416 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 RFNGQ9Y644 331 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 C17orf112F2Z3M2 114 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 PDCD1Q15116 288 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 ADIRFQ15847 76 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 ZNF726P1Q15940 193 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 MRPL52Q86TS9 123 aaKnown RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 SNX22Q96L94 193 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 NDUFAF3Q9BU61 184 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 BOKQ9UMX3 212 aaPredicted RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 SYNGR4O95473 234 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 COX5AP20674 150 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 SSX2Q16385 188 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 IQCJQ1A5X6 159 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 TMEM249Q2WGJ8 235 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 ZNF295-AS1Q8N0V1 137 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 OR5P3Q8WZ94 311 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 ASPMQ8IZT6 3477 aa12.53□□□□□ -0.4
DDX56-205ENST00000433257 GGCTO75223 188 aaKnown RBP12.52□□□□□ -0.4
DDX56-205ENST00000433257 KLF7O75840 302 aaPredicted RBP12.52□□□□□ -0.4
DDX56-205ENST00000433257 RD3LP0DJH9 198 aa12.52□□□□□ -0.4
DDX56-205ENST00000433257 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.4
DDX56-205ENST00000433257 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.4
DDX56-205ENST00000433257 CPEB3Q8NE35 698 aaKnown RBP12.52□□□□□ -0.4
DDX56-205ENST00000433257 MRPL37Q9BZE1 423 aaKnown RBP12.52□□□□□ -0.4
DDX56-205ENST00000433257 RBKSQ9H477 322 aa12.52□□□□□ -0.4
DDX56-205ENST00000433257 POLDIP2Q9Y2S7 368 aa12.52□□□□□ -0.4
DDX56-205ENST00000433257 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 XKRY2A2RUG3 117 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 C9orf172C9J069 976 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 H3BP45 60 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 J3QT63 122 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 TNFSF12O43508 249 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 CELA2AP08217 269 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 CD82P27701 267 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 NTF4P34130 210 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 SPCS3P61009 180 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 CATR1Q13166 79 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 FGFBP3Q8TAT2 258 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 NEIL1Q96FI4 390 aaPredicted RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 LURAP1Q96LR2 239 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 OR4C12Q96R67 309 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 ASCL3Q9NQ33 180 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 B4GALT7Q9UBV7 327 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 GAB2Q9UQC2 676 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 RBM7Q9Y580 266 aaKnown RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 EML6Q6ZMW3 1958 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 A8MWP6 167 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 PDE6DO43924 150 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 AMBPP02760 352 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 GZMBP10144 247 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 IDH3GP51553 393 aaPredicted RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 ACTL10Q5JWF8 245 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 FIP1L1Q6UN15 594 aaKnown RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 UNQ6494/PRO21346Q6UXR6 183 aa12.51□□□□□ -0.41
DDX56-205ENST00000433257 NANOS1Q8WY41 292 aaKnown RBP12.51□□□□□ -0.41
DDX56-205ENST00000433257 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 F6UZH7 168 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 G3V3Y1 287 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 IAPPP10997 89 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 GDF1P27539 372 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 GFRA1P56159 465 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 COL10A1Q03692 680 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 SPANXN5Q5MJ07 72 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 ZNF66Q6ZN08 573 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 MEGF10Q96KG7 1140 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 RTL8AQ9BWD3 113 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 FOXJ2Q9P0K8 574 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 WIPI2Q9Y4P8 454 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 NCOR2Q9Y618 2525 aa12.5□□□□□ -0.41
DDX56-205ENST00000433257 TRAV9-1A0A075B6T8 112 aa12.49□□□□□ -0.41
DDX56-205ENST00000433257 TRAV24A0A0B4J272 114 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms